Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1548 ATGGTTAAACCATCATCTTTCTCATATCATATGGAAAACCATCAAAACAATAACCCGACCCGTGACCCAGACCTAGCAGAAGAAGAGAAGAAGAAGCGACACCAACACCCTCAGGTTTGGGGCACGTGGGAGGAACTCTTGCTAGCGAGCGCCGTCAACCGCCATGGCTTCAAAGACTGGGACACCGTCGCCATGGAGGTACAGTCGCGGACCTCCGTACCCAACCTACAAGCCACCGCGCTCCACTGCGAGCAGAAATTCCACGATCTCAACCTCCGATTCGCCGACCAATTAAACGACGCCGTGCCGCCGCTTCTCCAGAACGGCGCGGCCGCCGTCGATAGCTCTGATCATGTCCCCTGGCTCGACGAATTGCGAAAGCTCCGCGTCGCCGAGCTCCGCCGCGAGGTCCAACGCTCCGACGTTTCTATCCTGTCGTTGCAGTTGAAGGTGAAGAAGTTGGAGGAGGAGAGAGAGAAAGAAAATGACGGTAAAGTCGATGAGAAAGCAGATCTGGCGGTTTGCGGCGAGGCACGGCCCGGAAACGATGGAACCGGCGGAGAAAGGGAAGTTCCGGAGCCGACCGGTTCTGAACCGGAGATTCGCCGGCTCGACGAGAGCACCACGAACACTGATAAGCTTTTGCCAACCACCGGTGACGAGTCGGACCGGGAAAATCAGTCGGTTAATGAGTCGAACTCGACCGGTTCGCGGTTTGAGGGAGGGAAAACCGGAGCAGGAGATGGTGATGGGAAGACGGGGGTAGGGGCGGTTCCGGTTCATCCCGGTCCGAAAGAACCGGATCCGGTTGGCAGGAAGCGGAGACCGATTGGGGAGGAATCGAATAACGGAAGCTACGATACTGAGGTTAAAGTTCCAACGTGCGAGTCGCAGCCGCCAAGTGAGGAGAGGAAGGCAGAGGATGGTGGCTCGTCCGAGTTGCGTGATGACTCGGTGGGCCACTCGGGGGAAGGGGGACGAGGGACGAGGGAGAGCAGCGAGGTGCAGAGCTCTGCTAGCCTGACGAGGAAGAGGAAGACGCGGCGGAGGAAGGAGGCTTCCGGTGGTAGTGGTGGCGGCGAGGTGGCCCTGGAGAGTGACGAGACCATGGTGAAATCCGAGCCGTTGATTGGGCTGTTGGAGATGATCAAGGCACACGAACACAGCTCATTGTTCGAGCGCCGTCTCGAGAGCCAGGAATCGGAAAGATACAAAAACATTGTAAGACAGCACGTGGATTTGGAAACCATACAATCGAGACTCCATAAAGGACATTATTCCTCTAGCACCAACTCTTTCTTTCGTGACCTTCTCCTCCTCTTTACGAATGCCACCGTCTTCTTTACCAGAGACTCCCTGGAATCAATGGCGGCGCAGCAGCTGCGGCGCCTCGTCATGGCAGAGATGAAAAACCAAGGCCAAGCACAATCTGATCCCACCCCACAGAAGACGGATTCCAACCCTCCAAACGCTCCTCAAGCCAAACCAGAATCTCTCCTTTCCAAGCACAAAGCCTCTGCTCCAATATTGGTATGCCGAAAACGCAGTTCAATGTCATCTAAACCTTCTCCGGCGACCTTTGGCCAAAAGGGTGACCAACCCATCACCGATAAGAAGGAAAAACCATCTTCTGATGCAAAACCACCCATGAAACCCTCTTCTTCCGAGACAGATGAAGATGAGCCTCCCAAGGCCAAGGAAAAGCCGGTCACCGGAGCTCGAAGCCTGAGAAGAAGCAACAAGAACCTCAGCAGCAACAGCAATTCTGGCAATAAGAAACTCCCCACTAACTCCACCATAAAAGCAGCGACTTTGGTGACCAAGGCTGTCGAAGCCGCAAAACCAGACAAGAGCAAAGCAGAGGGAGGGCAGGACAAGAAGAAGAATGCCGCTGCTGATTTCTTGAAACGAATAAAGCGAAACGCTCCAGTGGAGGCACTGAAGAGTGGCAGTGGTAGTGGTGGAGGAAGTAGTAGCAGCAGCAGAGGTGGGACTGCAAGTATGAAAGAGCAAAAGAAAATTGTGAATAGTGGAAAGGGTGATAATAAAGGGAAAGAAAGGGCGTCAAGGCATAATAACGGTGGAGGAGGAGGGTCAGGGGATAAAAGGAACAAGAACGTTGTTGAGAATAGCAAGAGGAGTGTAGGTAGGCCTCCAAAGAAAACAGCAGAAAGCAATACAGCTTCTGCAAAGCGTGGGAGGGAAAATAGTGCTAGTGCTAGTAAGGATAAGCGACCCAAGAAACGTTCTAAGAAATGA 2259 0.5365 MVKPSSFSYHMENHQNNNPTRDPDLAEEEKKKRHQHPQVWGTWEELLLASAVNRHGFKDWDTVAMEVQSRTSVPNLQATALHCEQKFHDLNLRFADQLNDAVPPLLQNGAAAVDSSDHVPWLDELRKLRVAELRREVQRSDVSILSLQLKVKKLEEEREKENDGKVDEKADLAVCGEARPGNDGTGGEREVPEPTGSEPEIRRLDESTTNTDKLLPTTGDESDRENQSVNESNSTGSRFEGGKTGAGDGDGKTGVGAVPVHPGPKEPDPVGRKRRPIGEESNNGSYDTEVKVPTCESQPPSEERKAEDGGSSELRDDSVGHSGEGGRGTRESSEVQSSASLTRKRKTRRRKEASGGSGGGEVALESDETMVKSEPLIGLLEMIKAHEHSSLFERRLESQESERYKNIVRQHVDLETIQSRLHKGHYSSSTNSFFRDLLLLFTNATVFFTRDSLESMAAQQLRRLVMAEMKNQGQAQSDPTPQKTDSNPPNAPQAKPESLLSKHKASAPILVCRKRSSMSSKPSPATFGQKGDQPITDKKEKPSSDAKPPMKPSSSETDEDEPPKAKEKPVTGARSLRRSNKNLSSNSNSGNKKLPTNSTIKAATLVTKAVEAAKPDKSKAEGGQDKKKNAAADFLKRIKRNAPVEALKSGSGSGGGSSSSSRGGTASMKEQKKIVNSGKGDNKGKERASRHNNGGGGGSGDKRNKNVVENSKRSVGRPPKKTAESNTASAKRGRENSASASKDKRPKKRSKK* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1548 752 MobiDBLite consensus disorder prediction 469 600 - -
Amo02g1548 752 PANTHER BNAC04G22430D PROTEIN 23 752 - -
Amo02g1548 752 MobiDBLite consensus disorder prediction 193 209 - -
Amo02g1548 752 SUPERFAMILY Bromodomain 374 472 IPR036427 GO:0005515
Amo02g1548 752 MobiDBLite consensus disorder prediction 266 280 - -
Amo02g1548 752 MobiDBLite consensus disorder prediction 651 672 - -
Amo02g1548 752 MobiDBLite consensus disorder prediction 21 36 - -
Amo02g1548 752 Pfam Bromodomain 379 458 IPR001487 GO:0005515
Amo02g1548 752 SMART bromo_6 369 474 IPR001487 GO:0005515
Amo02g1548 752 MobiDBLite consensus disorder prediction 705 719 - -
Amo02g1548 752 MobiDBLite consensus disorder prediction 298 328 - -
Amo02g1548 752 Pfam Myb-like DNA-binding domain 38 72 IPR001005 -
Amo02g1548 752 MobiDBLite consensus disorder prediction 1 36 - -
Amo02g1548 752 Coils Coil 144 171 - -
Amo02g1548 752 MobiDBLite consensus disorder prediction 612 752 - -
Amo02g1548 752 MobiDBLite consensus disorder prediction 674 690 - -
Amo02g1548 752 MobiDBLite consensus disorder prediction 720 735 - -
Amo02g1548 752 MobiDBLite consensus disorder prediction 155 367 - -
Amo02g1548 752 MobiDBLite consensus disorder prediction 1 20 - -
Amo02g1548 752 CDD SANT 40 73 IPR001005 -
Amo02g1548 752 SUPERFAMILY Homeodomain-like 33 73 IPR009057 -
Amo02g1548 752 MobiDBLite consensus disorder prediction 612 643 - -
Amo02g1548 752 CDD Bromodomain 379 469 - -
Amo02g1548 752 ProSiteProfiles Bromodomain profile. 384 455 IPR001487 GO:0005515
Amo02g1548 752 MobiDBLite consensus disorder prediction 470 494 - -
Amo02g1548 752 MobiDBLite consensus disorder prediction 575 600 - -
Amo02g1548 752 MobiDBLite consensus disorder prediction 533 574 - -
Amo02g1548 752 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 23 752 - -
Amo02g1548 752 MobiDBLite consensus disorder prediction 155 174 - -
Amo02g1548 752 MobiDBLite consensus disorder prediction 281 295 - -
Amo02g1548 752 Gene3D - 363 479 IPR036427 GO:0005515
Amo02g1548 752 MobiDBLite consensus disorder prediction 516 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1548 Amo-Chr2 41767540 41772555 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo02g1548 Bromodomain 2.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1548 - - adu:107458545 1302.35