Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1546 ATGGGTCTCTATGGTTACTGCTACTCAGGACATGCTGTGTTCCCAAACTTGTATACAGCCATGGCAAACAGAAATCAATTCCCTGCAGTGCTTTTAGTATGTTTTGCACTCTGTACAGTTATGTATGCTGCAGTAGCTATTATGGGATACACAATGTTTGGAGAATATACATTGTCTCAGTACACTCTTAACATGCCTCAAGGCATAGTGGCCACCAAACTTGCTGTGTGGACAACGGTGGTGAATCCATTTACCAAATATGCATTGAGTTTGACTCCAGTGGCAAAGTGTCTAGAGGAGCTGATACCATTAAACGACCCCAAGTTTAACTTATATTCAATCTTCATCCGAACAATGTTAGTGGTTTCTACACTGCTTGTTGGTCTTTCTGTTCCCTTTTTTGGTTTGGTAATGTCATTGATTGGATCTTTACTCACAATGTTCGTTTCCTTGATTCTTCCCTCTGCTTGTTTCCTAAAGATTAAATGGGGCAAAATCTCTCAAATTCAGGTAGCACTTTGTGTTACAGTTATGATAGTAGCTGTTGTATCCTCCGCTTTTGGATCATATTCAGCAATCTCAGAGATTATTGAACAGTTGTTTGGATAA 609 0.3957 MGLYGYCYSGHAVFPNLYTAMANRNQFPAVLLVCFALCTVMYAAVAIMGYTMFGEYTLSQYTLNMPQGIVATKLAVWTTVVNPFTKYALSLTPVAKCLEELIPLNDPKFNLYSIFIRTMLVVSTLLVGLSVPFFGLVMSLIGSLLTMFVSLILPSACFLKIKWGKISQIQVALCVTVMIVAVVSSAFGSYSAISEIIEQLFG* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1546 202 PANTHER OS05G0424000 PROTEIN-RELATED 1 199 - -
Amo02g1546 202 Pfam Transmembrane amino acid transporter protein 5 191 IPR013057 -
Amo02g1546 202 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1546 Amo-Chr2 41684589 41688162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1546 1 200 Amino Acid or Auxin Permease AAAP Family AT5G02180 53.000 3.53e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1546 K15015 - gmx:100781123 319.316