Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1526 GGTCACCATCGTCGTATCTGCGCTCATTGTCGCCACTCAACCAAGTTGTCTCTGCTCTCACCGTTGCATGTCACCCTTGTTGTCTCTGTGCCGACCGTCGCCGCGCGCCTATCATCTCGTTCTCTCTGCTCACCATCGTCGAGAAGGTGTTTTCCTAAGGAATGCTTGAGCACAATATTGGTGGCTTTTGATTTGACCAGAGAGGTAGTTCATAGTTGCAAGCTTGATCCTTGTGTTCAGAGAGTTTTATCAGCAAGACGAGCTTTGAGGGCAGTGGTGAGGCTGCAGGCTATATTTCGCGGAAGGCTAGCGAGGAAGCAAGCTGCTGTTACTCCAAGGTGCATGCAGGCTCTTGTTCGAGTTCAAGCTCGCGTCCACACTAGGAATGTGAGGAACTCTCCAGAAGGGAAAGCCGTGCAGACACTATTAGATCAGTACCGCAACCAAGCTGATCCTATCAAGAAGGCTGAGGCCATGAATATTTATGATTTGAACAAAATGTGCATCAAGATTTGA 516 0.4922 GHHRRICAHCRHSTKLSLLSPLHVTLVVSVPTVAARLSSRSLCSPSSRRCFPKECLSTILVAFDLTREVVHSCKLDPCVQRVLSARRALRAVVRLQAIFRGRLARKQAAVTPRCMQALVRVQARVHTRNVRNSPEGKAVQTLLDQYRNQADPIKKAEAMNIYDLNKMCIKI* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1526 171 PANTHER IQ-DOMAIN 5-RELATED 85 145 - -
Amo02g1526 171 ProSiteProfiles IQ motif profile. 90 117 IPR000048 GO:0005515
Amo02g1526 171 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 85 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1526 Amo-Chr2 40158386 40161621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1526 87 157 IQD Protein Family AT1G72670 59.155 3.38e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1526 - - aip:110269403 170.629