Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1510 ATGTTGAGGAGGGATACTCCTTGGGAGACATGTGGGTTGACAACTTATTTTAACTGGAAGAAGATGGCAAAACTTGAGAGTGCAATTGTTTGGCACCATCAAGAAGCCGATCCTTATTTTGGATCATGCGAAGCCAAAGAGCTTCTTGATCACCTTGAGAATGTGCTGACCAATGAGCCTGTTGTTGTTAAAATGGGGCAACACATAGTTGAAATGAAACCTCAGGTACACAACGATAAAGGTGTGAGCATGGGTATAGTTGTGGAGAATCTAATCTCAAGCCTGAGGAGTGAGGATGAAGACGTGTTTGAAATCATTGCTCGTTCAGTTTCTAATCTAGCACTTCCAATAATATCACAAGTGTTTGCATGCACAGTTGGCCAGAAACCAAGCATGGCAAAATTGAAATGGGTTGAAGAAGTGAATTTCCATCCCAAAAAGAGTTAA 447 0.4139 MLRRDTPWETCGLTTYFNWKKMAKLESAIVWHHQEADPYFGSCEAKELLDHLENVLTNEPVVVKMGQHIVEMKPQVHNDKGVSMGIVVENLISSLRSEDEDVFEIIARSVSNLALPIISQVFACTVGQKPSMAKLKWVEEVNFHPKKS* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1510 148 Pfam Trehalose-phosphatase 26 135 IPR003337 GO:0003824|GO:0005992
Amo02g1510 148 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 22 137 - -
Amo02g1510 148 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 22 137 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1510 Amo-Chr2 38815348 38816037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1510 8 134 Trehalose Biosynthesis Gene Families AT1G23870 47.799 3.56e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1510 K16055 - gmx:100810498 173.711