Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1478 ATGGCCCCGGGAATAGGCAGTGCAAGAATGGCTAAAGTGCTATTACTGTGTATGTTCGTGCTTCACTCTGATATGGCTTATGCAGCTATCCACAGAGTTGGAGATGCAGCTGGTTGGACTTTTCAGGTTACCAACTGGCCTAACGGAAAGCAATTTATGTCTGGCGATATACTCGTATTCAACTATGCAGTTGGAGCACATAACGTGGTAGTGGTGAACAGGGCCGGTTATCAGACATGCAGTACTCCGCCAGGAAGCAAGGTGTATGTGTCAGGGAACGATCGAATCACGCTCACCAAAGGATTAAACTACTTCATTTGTAATTTTCCTGGCCACTGTGAGGGAGGGATGAAAATTGCAGTCAATGCTATATGA 375 0.4613 MAPGIGSARMAKVLLLCMFVLHSDMAYAAIHRVGDAAGWTFQVTNWPNGKQFMSGDILVFNYAVGAHNVVVVNRAGYQTCSTPPGSKVYVSGNDRITLTKGLNYFICNFPGHCEGGMKIAVNAI* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1478 124 PANTHER BASIC BLUE-LIKE PROTEIN 10 122 - -
Amo02g1478 124 PANTHER BLUE COPPER PROTEIN 10 122 IPR039391 GO:0009055
Amo02g1478 124 Pfam Plastocyanin-like domain 39 117 IPR003245 GO:0009055
Amo02g1478 124 SUPERFAMILY Cupredoxins 29 123 IPR008972 -
Amo02g1478 124 CDD Plantacyanin 33 123 IPR041844 -
Amo02g1478 124 ProSiteProfiles Phytocyanin domain profile. 29 124 IPR003245 GO:0009055
Amo02g1478 124 ProSitePatterns Type-1 copper (blue) proteins signature. 101 117 IPR028871 -
Amo02g1478 124 Gene3D - 29 123 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1478 Amo-Chr2 37450068 37450837 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1478 15 124 Phytocyanin Superfamily AT1G17800 39.655 4.87e-22 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1478 - - zju:107427848 167.162