Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1458 ATGACCACCATCCGCCGCTTTTGCTGCAACGATCTCCTTCGCTTTGCCTCCGTCAACCTAGACCATCTTACTGAGACCTTCAATATGTCTTTCTACATGACCTATCTCGCCAGATGGCCAGACTATTTTCATGTTGCCGAAGGCCCTGGAAACCGAATCATGGGTTACATTATGGGTAAAGTAGAGGGACAAGGAGAATCTTGGCATGGGCATGTCACTGCAGTAACCGTTGCTCCCGAGTATCGGCGGCAGCAATTAGCCAAGAAACTCATGAATTTGCTAGAAGACATCAGCGACAACATTGACAAGGCTTATTTCGTTGATCTTTTTGTGAGAGCATCAAATGCACCAGCCATCAAGATGTATGAAAAGCTTGGCTATGTGATTTATCGACGAGTGCTACGCTACTACTCTGGGGAAGAAGATGGATTGGATATGAGGAAGGCATTGTCTCGTGATGTTGAAAAGAAGTCAATCATTCCTCTTAAACGACCAATCACGCCGGATGAATTAGAGTATGATTAA 525 0.4514 MTTIRRFCCNDLLRFASVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDNIDKAYFVDLFVRASNAPAIKMYEKLGYVIYRRVLRYYSGEEDGLDMRKALSRDVEKKSIIPLKRPITPDELEYD* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1458 174 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 173 - -
Amo02g1458 174 CDD NAT_SF 45 97 - -
Amo02g1458 174 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016407
Amo02g1458 174 Gene3D - 2 162 - -
Amo02g1458 174 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016407
Amo02g1458 174 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 173 - -
Amo02g1458 174 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1458 Amo-Chr2 36665693 36668917 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo02g1458 Acetyltransf_1 8.3e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1458 K17972 - gmx:100306394 355.91