Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1342 TCATTCTGTTATCTGTGGTTGCGGGAGCCATCACTGGAACTCTGTGATTGCGGGAGCTATCATTGGAACTTGTTTCCATCAGCTGGGCTCTGGCATCAACTTAGGTTTACATCTGATCGTGAACAAGCTGTTGCAGGTGGAAGGGGTTTATCATCCCCATTTCTCAGCCGGCTACGAATCACGTGCGGTTCAGTTCTTTACTCATTGGATTTCAAGCTTTGGTTGTCATCAAGGGGTAAAATCATGTCAAGAAATGAGGATGATGTGAAGAATGATTCTGATAATGATTTGGGTGATGATTTCAATTATCAACCGAATGCAGAAGATAATGCTGAAGACGACGATATGGATTCGCTGGATTCTATTAGCAAGAATGAAGAAGTTTCTGGTGTAAAAAGAATAGTGGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAAGCTTGCCAATTTTATAATGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGACTGGAGGAATATTAGGTATCTTGATCTGGATGATAGATCAAGGGAGGCAAGGTCACTAATGCAAACCAAGTGTCCAGCTTGGCTTAGGCTGCTCGTAGACCACCCAACATTTTGTACCCAAAACAAACGCGCTACCAAGCTGCGCTACATCCCTTTCTCCCCGAAGCATTTCGTCGCTTACTACGCCCTTCCTCGTCTCTGGGTGCCTAGCATAGCTTTGTATCGGCTAAGTTCACGAGTTGGAGATAAGCGGACTCGAACCGCTGACATCCGCCACAGGGTAAACCACCGCCTCTCGTACATGGAAGTACCTGGATGGAAAAGACGTACAAAACTTGTGCGATGTGGTCCCATTGTTTCCTCTAGGATAAGTTTTTTTGTTACA 960 0.4448 SFCYLWLREPSLELCDCGSYHWNLFPSAGLWHQLRFTSDREQAVAGGRGLSSPFLSRLRITCGSVLYSLDFKLWLSSRGKIMSRNEDDVKNDSDNDLGDDFNYQPNAEDNAEDDDMDSLDSISKNEEVSGVKRIVDLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMRKDDVVRDNQGRIISRQLVCNKEDWRNIRYLDLDDRSREARSLMQTKCPAWLRLLVDHPTFCTQNKRATKLRYIPFSPKHFVAYYALPRLWVPSIALYRLSSRVGDKRTRTADIRHRVNHRLSYMEVPGWKRRTKLVRCGPIVSSRISFFVT 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1342 320 MobiDBLite consensus disorder prediction 85 122 - -
Amo02g1342 320 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 84 220 - -
Amo02g1342 320 Pfam FAR1 DNA-binding domain 155 222 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1342 Amo-Chr2 29894679 29897274 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo02g1342 FAR1 5.1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1342 - - ahf:112742151 254.218