Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1335 ATGTCAAATATTCTCAACAACAATGAAATTGATTACGGTTTCCACAACGTCTCATATAGCGAGTACCCAAACAGAGTGTACGCCATTGGACTATGTAGAGGAGACATTAAGCTGGAGCAGTGCCGAACTTGCCTAAACCAATCCAGAGCCAATCTCATGGCGGTTTGTCCAAATCGCAAGGTGGCTATCGGGTGGTACAACGACGAACTATGTATGCTGCGATACTCGAATCGCAGCATATTCGATCGGATGGACAATGGACTGGCTTATTATAAGAAAAGCAACAAAAATGCCACTGATTTGAATGTGTTCAATACAAAATTGAACGATTTGTTGAATGGCTTGAAAAGAAAAGCTTCTTCTGGTGACTCTCGGTTAAAGTATGCTGTGGGAAACTTTAGTCTTCCCAATTTTGATGATGTTTATGGTCTTCTTCAGTGCACGCCTGATTTGTCTGGAAAAGATTGTGATAACTGCATAGCTCAATCTATTGAAAGAATATCAAAAGATTGTTGTAAAGATAGCATGGGTGGTAGGATTGTTAGGCCAAGTTGTTTTATGAGATTTGAGACATCGTATCAATTCTATGGGCCAACGGCGTATATGCCACCTTTGCCGCTAGCATCTCTGCCGCCCACTACCACCTCTGTAACTAACCCGTCTTCAGGAGGAAAAAGCCACACTTCAGTACTAGTCATCACTATAACAGTACCTATAGTGGCTGTGATTATGTTCATGTTTATTTTTATCTGCAACAGGTATCTAAGAAAGAGGAAGCAAAGGAAAAGCAATTCAAACGTTACAAATGACTTTTCTGATGCTAATAAGCTTGGACAAGGTGGATTTGGGGCTGTTTACAAGGGTATTCTCACTAATGGACAAGAGATTGCTGTAAAAAGGTTGGCATGGATTATCCTACTTGGTTATTGTTTGGAAGGAAGAGAAAGGTTACTCGTCTATGAATTTGTACCCAATAAAAGTCTTGATTACTTTATATTTGATCACAGCAAGAGAGCAAATTTGGATTGGGAAAGCTGCCACAGAATCATTGGAGGTATTGCTCAAGGCCTTGTCTACCTTCATGAGGATTCTCGATTGCGTATTATTTATCGTGATCTCAAAGCAACAAATATTCTTTTAGATGAAAAGATGAATCCTAAGATATCAGATTTTGGTACTGCGAAACTATTTGCTACAAGTCAAACTCACTCTAATACAAATAGAATTGTTGGAACTTATGGATATATGGCACCTGAATATCAAATTTATAGACTATTTTCAATCAAGTCGGATGTGTATAGTTTTGGTGTATTAGTTCTTGAGATTGTAAGTGGCAAGAAAAGCAGTGGCAATTGTCAGAGTGAGAATCCAGAAACTCTCGTGAACTTTGCATGGAGAAATTGGAAGGATGGGACAATTTCAAACTTTGTAGATACCACATTAAGAAATAGTTCACAGAATGAAATAATGAGATTGATCGACATTGCTTTACTATGTGTTCAAGCAAATGAAGCTGATAGACCAACCATGGCTACAGTTTTACTCATGCTTAATAATCATTCGGTCACACTCGCAGTACCTTCAGAACCTGCATTTTTGCTGAATACAGGATCAAACACATCGACAAAAAAACCAGCACAAGAATCAGTCAATGAAGCCTCAATTATTGATCCATATCCTCGCTAA 1686 0.3861 MSNILNNNEIDYGFHNVSYSEYPNRVYAIGLCRGDIKLEQCRTCLNQSRANLMAVCPNRKVAIGWYNDELCMLRYSNRSIFDRMDNGLAYYKKSNKNATDLNVFNTKLNDLLNGLKRKASSGDSRLKYAVGNFSLPNFDDVYGLLQCTPDLSGKDCDNCIAQSIERISKDCCKDSMGGRIVRPSCFMRFETSYQFYGPTAYMPPLPLASLPPTTTSVTNPSSGGKSHTSVLVITITVPIVAVIMFMFIFICNRYLRKRKQRKSNSNVTNDFSDANKLGQGGFGAVYKGILTNGQEIAVKRLAWIILLGYCLEGRERLLVYEFVPNKSLDYFIFDHSKRANLDWESCHRIIGGIAQGLVYLHEDSRLRIIYRDLKATNILLDEKMNPKISDFGTAKLFATSQTHSNTNRIVGTYGYMAPEYQIYRLFSIKSDVYSFGVLVLEIVSGKKSSGNCQSENPETLVNFAWRNWKDGTISNFVDTTLRNSSQNEIMRLIDIALLCVQANEADRPTMATVLLMLNNHSVTLAVPSEPAFLLNTGSNTSTKKPAQESVNEASIIDPYPR* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1335 561 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 305 539 - -
Amo02g1335 561 ProSiteProfiles Gnk2-homologous domain profile. 1 80 IPR002902 -
Amo02g1335 561 SMART serkin_6 271 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g1335 561 SUPERFAMILY Protein kinase-like (PK-like) 265 535 IPR011009 -
Amo02g1335 561 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 263 - -
Amo02g1335 561 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 267 302 - -
Amo02g1335 561 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 2 263 - -
Amo02g1335 561 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 305 539 - -
Amo02g1335 561 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 267 302 - -
Amo02g1335 561 Gene3D Transferase(Phosphotransferase) domain 1 323 526 - -
Amo02g1335 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 368 380 IPR008271 GO:0004672|GO:0006468
Amo02g1335 561 Pfam Protein tyrosine and serine/threonine kinase 306 514 IPR001245 GO:0004672|GO:0006468
Amo02g1335 561 Pfam Salt stress response/antifungal 14 77 IPR002902 -
Amo02g1335 561 Pfam Salt stress response/antifungal 94 191 IPR002902 -
Amo02g1335 561 ProSiteProfiles Gnk2-homologous domain profile. 86 194 IPR002902 -
Amo02g1335 561 Gene3D Phosphorylase Kinase; domain 1 257 304 - -
Amo02g1335 561 Gene3D - 1 79 IPR038408 -
Amo02g1335 561 Gene3D - 85 195 IPR038408 -
Amo02g1335 561 ProSitePatterns Protein kinases ATP-binding region signature. 277 299 IPR017441 GO:0005524
Amo02g1335 561 MobiDBLite consensus disorder prediction 536 561 - -
Amo02g1335 561 ProSiteProfiles Protein kinase domain profile. 271 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1335 Amo-Chr2 29606394 29610098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1335 13 533 Receptor kinase-like Gene Family AT4G38830 43.478 3.07e-153 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo02g1335 PK_Tyr_Ser-Thr 4.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1335 - - adu:107463438 838.95