Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1320 ATGGTTAAATCATGCTGGAAACCATTGGTGGAAGGCGAAGATAATGGAGATGGCGGTGGGAGTAGTAGTGGGAGAGTTGATGGGTTGTTGTGGTACAAAGATTTGGGGTACCATCTTCATGGTGAATTCTCAATGGCTGTGATTCAAGCAAATAACTCATTGGAAGATAGAAGCCAAGTTGAATCTGGACCTTTGAGTTCCAACCACCATTTGGGTCCTCATGGAACCTTCATAGGTGTATACGATGGTCATGGTGGAAACGAAGCCTCACAGTTTGTTAGTGACAATCTTTTCTCTAATCTCAAGAGGTTTGCAGCTGAAAATCAAAGCATATCAGAAACCGTTATAAAAAAAGCATTCTCAGCAACAGAGGATGGTTTTTTGTCTCGAGTTAAGAAACAATGGCTAACTAAGCCGGAGATTGCATCCACAGGAACTTGTTGCTTGGTTGGAATAATCTGCAACGGCATGCTTTACATCGCAAACTCCGGCGACTCGAGGGCGGTGCTAGGTAGATTAGAGAGACAAACAAGAGAAGCATCTGCTGTTCAATTATCCGTCGAACATAATGTTAATCAAGAAACTGTTAGAGATGAACTTCGTTCAAAGCACCCCTTTGATTCACAGATTGTGGTTATGAGACACAATGTTTGGCGTGTAAAAGGACTCATACAGGTTTCAAGATCCATTGGTGATGCATATCTGAAGAGAGCAGAGTTCAATAGAGATCCTCTGCCATCTAAGTACAGACTAGCTGAGACATTCTTCAAGCCAATTCTTAGTTGTGAGCCATCAATATCGGTGCACAAACTCCACCCTGATGACCAATTCCTCATATTTGCTTCTGATGGTTTATGGGAGCACCTTGGCAACCAAGAAGCTGTTAGCATAGTCAGCAACAACCCACCTAATGGAATTGCAAGAAGACTAGTGAAAGCTGCACTAAGAGAAGCAGCAAAGAAGAGAGAAATGAGATTTGCAGACCTCCAAAAGATTGAACAAGGAGTAAGGAGACATTTTCATGATGACATAACCGTGATTGTTGTGTTTCTCAATCCCAAACTTATTGATACAAGCTCTCTATTAGGTTCTCCTCTTTCAATCAAGGGAGGCGAATTTTAA 1122 0.4198 MVKSCWKPLVEGEDNGDGGGSSSGRVDGLLWYKDLGYHLHGEFSMAVIQANNSLEDRSQVESGPLSSNHHLGPHGTFIGVYDGHGGNEASQFVSDNLFSNLKRFAAENQSISETVIKKAFSATEDGFLSRVKKQWLTKPEIASTGTCCLVGIICNGMLYIANSGDSRAVLGRLERQTREASAVQLSVEHNVNQETVRDELRSKHPFDSQIVVMRHNVWRVKGLIQVSRSIGDAYLKRAEFNRDPLPSKYRLAETFFKPILSCEPSISVHKLHPDDQFLIFASDGLWEHLGNQEAVSIVSNNPPNGIARRLVKAALREAAKKREMRFADLQKIEQGVRRHFHDDITVIVVFLNPKLIDTSSLLGSPLSIKGGEF* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1320 373 CDD PP2Cc 43 351 IPR001932 -
Amo02g1320 373 ProSiteProfiles PPM-type phosphatase domain profile. 39 351 IPR001932 -
Amo02g1320 373 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 371 - -
Amo02g1320 373 ProSitePatterns PPM-type phosphatase domain signature. 77 85 IPR000222 GO:0043169
Amo02g1320 373 SMART PP2C_4 34 349 IPR001932 -
Amo02g1320 373 Pfam Protein phosphatase 2C 70 320 IPR001932 -
Amo02g1320 373 Gene3D - 35 359 IPR036457 -
Amo02g1320 373 PANTHER ALPHABET, ISOFORM E-RELATED 3 371 - -
Amo02g1320 373 SUPERFAMILY PP2C-like 49 352 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1320 Amo-Chr2 28913851 28918543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1320 1 371 PP2C-type Phosphatase Gene Family AT3G55050 63.612 5.01e-179 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1320 K01102 - gmx:100814123 602.053