Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1301 ATGAAGGTACTTGCTGTGAAGAAACTTGAAAAGAGTGTTTGTAATCACCAGAAAGAGGAGGATTTTCTTGAATTAGTGAATGGCATTGATAGAACACGACATGTAACAATCGTCAAGTTTATTGGTAATGGATCACTCTATGAGGCACTCCACTCAGAGGATGAATTTAAAACAAGACTCACGTGGAATGCTCGCATCCGGATAGCACTTGGGGCGGCTAGGGCCCTAGACTTTATTTCAACTTTGATAGTACTTCCAAAGTTAAATTGCTAA 273 0.3993 MKVLAVKKLEKSVCNHQKEEDFLELVNGIDRTRHVTIVKFIGNGSLYEALHSEDEFKTRLTWNARIRIALGAARALDFISTLIVLPKLNC* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1301 90 PANTHER OS01G0253100 PROTEIN 3 79 IPR045271 GO:0004714|GO:0006468
Amo02g1301 90 Gene3D Transferase(Phosphotransferase) domain 1 1 85 - -
Amo02g1301 90 SUPERFAMILY Protein kinase-like (PK-like) 3 81 IPR011009 -
Amo02g1301 90 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 3 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1301 Amo-Chr2 27771367 27772572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1301 2 79 Strubbelig Receptor Gene Family AT4G03390 44.681 3.78e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1301 - - ahf:112737625 121.324