Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1300 ATGATTGAACAGAGCGGTTTATTGCTATGTGTGTTCATATGCTTCTTGCTATATCATGCTGTGAGGGCTGAGATACCATTAGGTTCTAGACTTTCGGTGGTTGACAATGGCAGCTGGGTTTCCAAAAATGGTAATTTTACCATTGGATTTCTTGAGATTTCGGATGAGCCTGGCCGGTTTAGTTTTGGCATTCGTTTCAGCGACAAGTCTATACCGTATAGTCAACAAAGAATGGTGTGGAGTGCTGACTTTCAGATTGGAGTAGGTAACATGTCCTATTTCCTTTTCACTACAGATGGTGATATGCTCCTGTTTGATGATCAGGGAATATCTTCATGGAGCAGCCAAACCAGTAACAAGGGTGTCGTGTCGGCTTCTCTTCTTGACAATGGAAATCTTGTTCTAATCGACAGAGAACAAAAGGTCATTTGGCAAAGTTTTGATAGTCCATATGATACACTTCTCCCAGGACAGTTTCTATCTTGTGATAAGATGCTTCAAGCTGCAAGTACGAATCTACTGTCCAGTTACTACAGCCTGTCTATGAACGTTTCGGGACACTTGATGCTCCTTTGGCAAGGTATTATTCCCTACTGGACAAGCCAAAACCCTTCTGTTCCGAATCTCACTGCATATGTAACAAACAATGGAGCTCTGCAACTTTTAGACAAAAATCTTAATGTTGTTTGGACCGTGTTTGGAGAAGACTACGATGAATATGTTAAATACCGGTTTCTTAGGATAGATGTGGATGGCAATCTCCGCTTATATTCGTGGGTGGAGGCTTTGCAGTCATGGAAATCTGTCAGGCAAGCTGTTCAGAACCAGTGCAAGGTTTTTGCAACTTGCGGTAAACGGGGGGTCTGTGTTTTGTCTTCCTGTGGTACTGCTGATTGTGTGTGCCCTTTCAACCAGACGGACACTGATGAGACTTGTTTGATTCCATATGAACAAAAGTGTAAACATGGTTCCACTATGATCACATATAGGAATATACACCTATTTGGGCTTTTCCCTATTGATGGTCCGGCTATCATGACTAGCATGAATAAATGTATGCAATTGTGCCAGAATGACTCTAGTTGTACTGCCGCAACCTTTTCTAATCATTTTCGTCCCCAATGCTCGATAAAGAAATCTGAGTATGTCACTGGCTATTTAGATTGGTCTCCAGACGTGGTATCATTTGTCAAGAGTTGCTCATCTACATCTGCCCCAAAGTTCCCATGTCAAAGTCAAAGCTCACCTCCAACAGAAGAAGATTCTGATATTCGTGTTCCTTGTCTAATAGGAATATCCTTAGACACAATTATCATCGCTGTTGTCCTTCAACTCGGATGTTTTTATCTTTTCATCTACAAAAGGAAAACCTCTACTAGATGCAAATACAATTTACCTTCCGCAGACACAAATTTAAAGGGCTTAGTTGTGTTGTTATCTTTTTCAGAGATCAAGAGCGTCACTGAGGATTTCAAAGATCGAATTGGGCCAAATATGTTCAAGGGCATGCTACTAAACAAATTCCCAGTTGCTGTTAAAGAGCTGATTGCATCCATAGATGCAAGGAAGTTCAGGACTGCTGTTCTGAAGATTGGAGGCATCCACCACAAGAACCTTGTGCAGCTGGAGGGCTATTGTTGCGAGTCCAATCATAGATTCTTGGTCTACGAGTACGTCAAAAACGGTTCTCTTGAGAAGTATATAGATGATTCCGCTCTTTGCAAGGAACTGACCTGGAGAAAAAGGGTTGACATATGCTTAAGCGTGGCCCAGGCCATTAATTATCTTCACTCTGAATGCAGGGAGTTCATAAGTCATGGAAATCTGAAGTGTGAAAATGTCATGTTGGATGAGAACTTAAAAGCCAAGGTGAGCGAATGTGGGTTTGCAATAGTAGACGGCGAGGCAGTGTACTGTGCCTTTTCTGCCCAGAGAGACATAGCAGATTTCGGCATGTTAGTCCTAACCTTATTGACCGGATGTAGAGATCAAAGTGATCTTTGTGAGTGGTCATATAAAGAATCGATAGAAGGGAATGCTGCAAATGTGATTGACAAAAGAATTGAAGGTGGTGCCAATTCAAATGAACTTGAGCGCGTTTTGAGAATCGCATTCTGGTGCCTACAAAGTGATGAACGTCGAAGGCCTTCAATGGAGGAAGTAGTGGCAGTACTGGAAGGAACTTTGAGTATTGATCTACCACCACCTCCATTTTGA 2217 0.4208 MIEQSGLLLCVFICFLLYHAVRAEIPLGSRLSVVDNGSWVSKNGNFTIGFLEISDEPGRFSFGIRFSDKSIPYSQQRMVWSADFQIGVGNMSYFLFTTDGDMLLFDDQGISSWSSQTSNKGVVSASLLDNGNLVLIDREQKVIWQSFDSPYDTLLPGQFLSCDKMLQAASTNLLSSYYSLSMNVSGHLMLLWQGIIPYWTSQNPSVPNLTAYVTNNGALQLLDKNLNVVWTVFGEDYDEYVKYRFLRIDVDGNLRLYSWVEALQSWKSVRQAVQNQCKVFATCGKRGVCVLSSCGTADCVCPFNQTDTDETCLIPYEQKCKHGSTMITYRNIHLFGLFPIDGPAIMTSMNKCMQLCQNDSSCTAATFSNHFRPQCSIKKSEYVTGYLDWSPDVVSFVKSCSSTSAPKFPCQSQSSPPTEEDSDIRVPCLIGISLDTIIIAVVLQLGCFYLFIYKRKTSTRCKYNLPSADTNLKGLVVLLSFSEIKSVTEDFKDRIGPNMFKGMLLNKFPVAVKELIASIDARKFRTAVLKIGGIHHKNLVQLEGYCCESNHRFLVYEYVKNGSLEKYIDDSALCKELTWRKRVDICLSVAQAINYLHSECREFISHGNLKCENVMLDENLKAKVSECGFAIVDGEAVYCAFSAQRDIADFGMLVLTLLTGCRDQSDLCEWSYKESIEGNAANVIDKRIEGGANSNELERVLRIAFWCLQSDERRRPSMEEVVAVLEGTLSIDLPPPPF* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1300 738 Gene3D Hepatocyte Growth Factor 324 403 - -
Amo02g1300 738 Gene3D - 19 150 IPR036426 -
Amo02g1300 738 PIRSF SRK 2 738 IPR024171 GO:0004674
Amo02g1300 738 ProSiteProfiles Protein kinase domain profile. 470 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g1300 738 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 201 IPR036426 -
Amo02g1300 738 ProSiteProfiles Bulb-type lectin domain profile. 24 148 IPR001480 -
Amo02g1300 738 Gene3D Phosphorylase Kinase; domain 1 454 558 - -
Amo02g1300 738 SUPERFAMILY Protein kinase-like (PK-like) 500 726 IPR011009 -
Amo02g1300 738 SUPERFAMILY alpha-D-mannose-specific plant lectins 168 268 IPR036426 -
Amo02g1300 738 Gene3D - 151 288 - -
Amo02g1300 738 SMART blect_4 30 150 IPR001480 -
Amo02g1300 738 Pfam D-mannose binding lectin 79 167 IPR001480 -
Amo02g1300 738 CDD B_lectin 30 150 IPR001480 -
Amo02g1300 738 Gene3D Transferase(Phosphotransferase) domain 1 559 732 - -
Amo02g1300 738 SMART ntp_6 321 399 IPR003609 -
Amo02g1300 738 Pfam Protein tyrosine and serine/threonine kinase 506 630 IPR001245 GO:0004672|GO:0006468
Amo02g1300 738 Pfam S-locus glycoprotein domain 239 304 IPR000858 GO:0048544
Amo02g1300 738 PANTHER OS07G0415500 PROTEIN 6 738 - -
Amo02g1300 738 ProSiteProfiles PAN/Apple domain profile. 320 400 IPR003609 -
Amo02g1300 738 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 6 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1300 Amo-Chr2 27768670 27771232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1300 431 736 Receptor kinase-like Gene Family AT4G05200 28.249 2.98e-38 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo02g1300 PK_Tyr_Ser-Thr 1.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1300 - - ahf:112737567 1281.93