LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo02g1286	ATGTCACAAGGGTATTGGAGTCTGACTTTCCATATATATGCATATGGCCACAAGCCCACAAAGATGGAAACTTACAACACAAGTATGGGGAGTGTTCACAAAAATTCAACAAAGAGTTCTGTTGAATTTGATGATTTGAGTTTTGAGTATAGTGGTTCCAGTGAAGAGAATGATATAAATATATCTCAAAAGAAGGGTACAATTGATGAAGCTATGAAAATGGTTGATCATGGAGATGGATTTGGTGAAGTTGAGAAGAAGTTAACTGAGTTGACCAAGGATGATATTTGGGGTATTGAGCATGATATACATGGTTTTGTTGCAAGGTGTGATGAAAAGGGTTATGATTTCAATGGCAACCTTAACATGAGACAAATGGTTTGTAATAGAGAGGGTACACGGAGAAAGAAGTATTTGGAGATGGAGAATAGGAAAAGAGACCATAGGCCGATAACACGTGTAATGTGTCAAGCCAGAATTAGATTTCACTATAATATGAAATTGAGGAAGTGGAAAGTCATTGTATTTGAAGAGACTCACAATCATAACCTTATCCCACCTAAATATATACAATTTGTCCCCGCATATCGCGTAATGACCGAGGCCGACAAAGCACAAGCCAACAGTCTACATGATTATGTGAGGCAATATTGGACAAATGAGCTATTATCTGATTTTAAGTCATTGTTCTCCAGTCCAGTTTTAACTACATATTTCGAAGACATCGAAAAGGAAGCAGCCAATATTTTTACCCAAAATATGTTTAAAGAGGTAAGGAATGAGATACTAGAAGCGAGTAAACTAAACGTTGTCGGCCATTCAAATAATGGTAACAAAATTGATGTGAGAATGAACAAATATCAGGAGCCGGCTATTGAATATAAGGTTCGGTAA	894	0.3669	MSQGYWSLTFHIYAYGHKPTKMETYNTSMGSVHKNSTKSSVEFDDLSFEYSGSSEENDINISQKKGTIDEAMKMVDHGDGFGEVEKKLTELTKDDIWGIEHDIHGFVARCDEKGYDFNGNLNMRQMVCNREGTRRKKYLEMENRKRDHRPITRVMCQARIRFHYNMKLRKWKVIVFEETHNHNLIPPKYIQFVPAYRVMTEADKAQANSLHDYVRQYWTNELLSDFKSLFSSPVLTTYFEDIEKEAANIFTQNMFKEVRNEILEASKLNVVGHSNNGNKIDVRMNKYQEPAIEYKVR*	298

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo02g1286	297	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	105	198	IPR031052	GO:0006355
	Amo02g1286	297	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1	105	198	-	-
	Amo02g1286	297	Pfam	FAR1 DNA-binding domain	105	185	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo02g1286	Amo-Chr2	27242658	27245588	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Amo02g1286		FAR1	2e-12	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo02g1286	-		-	adu:107487303	365.155