Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1275 ATGGAGAAATCTCGCCACCGCAGGTCCCCCGTTGCTTCCAGGAACCAACCGCACACTCTTGTTCTTCCTCAAGGGAGTAAGCAAGTTCATAGGCAGCGACAATTTCCCGATTTGTCTCCTGATTCTGTTTCTTGCGGTGGTGGGGTTGCAGACAAAGATTCCTTCTCGTTCAAATTTGGGTGGAGATCTTCAAAACAACTGTTCGGAACTCCAATTAAGAAGTTACTAGCTGATGAGATGTCGCAAGAAACCGAGTCAAAAAGAAGAAATCCGGGTGTTATTGCCCGTTTGATGGGTCTGGATGGCCTGCCTACTAACAAGCAGCAAAAGGATTCATCAGAAAATCCTGTAGAGAAAGTGCGAAACAGAGGAACATCATACGATGGTCGATCCTCTAGGAGGAGCTCAAAGGATCAACAAGAATTTAAGGATGTGTTTGAGGTCTCAGAGATCCCAATGGTAGAGAGCAGCAGGTATTCATCACATGTGTCTGCAAATGACCTGAGGAATGCCAACGAAGAGATGTCATTCATTGAGCAGAAGTTTATGGATGCCAAACGCCTTGCAACTTATCAGGATTTACAGTCATCGAGGGATTTCCATGATACACTTGAGGTGCTTGACTCTAACAAGGAACTTCTTCTGAAGTACTTTAAGCGGCCAGATTCTTTGTTTAAAAAGCATCTAAGTGATCTTCAAGCTGATCCTTTCGAATCACATTTGGGTCACACAGAAGCTATGCAATTACCTGAAATTGAGAAGTATGGAAATGAGTTTGACTGGAGATTAGATACCGACACAGCACTGTTGAGTTATGATAAATCTCATCAAAGGCAACATGATGGATATCCTCGGCAATTCAACAGAAGACATGTGATGCATAGTTCACCGCGATCATCAAAGCTTCAGTCAAAGGGAAAACATGAGCAAGGTGCTTCCCCTACAAAGATAGTTGTCCTAAAGCCTAATCTTGGGAAATCCCAGAGTGCTGTCCGGAATGTTTCATCTCCTTGTTCTCCACATATTTTTCAGTCTGAGCATGCAAATGATACTGAATTTTCAGATATCCGATATAGGGACTCCAAAATGTATCCGCAAAAGATTAATTTGCCTGATACTGCCCGGCCATTGAGGCACAACTCCTTGGAATCTAGAGAAATTGCTAAGGAAATCACTCGTCAAATGAAAAATAGTTTGAACAATGGTGGTTGCGTGATGTTGCCCTCTTCCAGACTTAGAGGATATGCTGGGGATGATAGTTCTTGCAGTGTATCTGGAAATGAATCTACTGAGGAATCAGTTGGAACTCCTGCTACTTGCGGAAACTCTTCTGATCTTAATAATTGTAGCAGGAGGTCATCACATTCTGGTGAATCATCTGTGAGTAGGGAGGCAAAGAAGAGATTATCAGAAAGGTGGAAAATGGCGCACAAGTCTCAAGAGATACAAATTATCAGCAAGAGCAGCACACTTGCTGAAATGCTTGCTATCACTGATAAGGATGTCAAGACCACAAATTTTGATGGAAGGTTTACTGAGGAACGGCACCGTAATAAACCTGCTGGGTGGGTTGAACCATTGGGTATCAGCAGCAGGGATGGTTGGAAGGATGGATGTATTGGAAGTTTGCCAAGGTCAAGATCTCTACCTGCTTCTTCTAATGTCTTTGGAAGTCCTAGAACAATCATGCGCAATGAAGTGCTTCGTGATGATCGATTTAGGATGCCAAAGGAAGCCATTAGACGGGAGAGGAGAAGAGGAAGGAGTCATGATCAGAGGCATGGTGTAAATAGTAGAAGCACAAGATCTGGTCACAAGAAATCTTGGTCTATGCTTTCGTCTGAGTTGGAAGGTAATGAGTTTTCACCAAGCTTTAGTGCCATTGAGAATAAAATGGAAATCAATCTTGAAGAAGGTTCACCTAAACTAGATGTTCCAACCACTGAATCTCTTGCTGTGACCCTCAAAGATACAAGTGTGCTTCCTGATACTATTGTGAGTGTGGCAAATGAAGATGCAGACAGGTCTTGTGAACCTTCTGATAAAGTACTGCCTGAAACATCTCTTGTTTTGACCAAAGGTGACAACAGGGTTGCTGACAAAGATAACTCAATTCAGCAGGAACTATCTGCTGGGTCTTCTGACGGAACTTCAGACTGCTTTCAACCACCTGTACCTGGACTTGAATCGTCATGTGGTAAAGATACTGATCAACCCAGTCCAGTCTCAGTCCTAGAACCTTCTTTTACAGATGATCTGTCGTCATCATGTTCCGAGTGTTTTGAAAGTCTCAGTGCTGACCTGCAAGGGCTCCGAATGCAGCTCCAGTTGCTGAAGTTGGAATCCGAAGGATATGCGGAGGGATCTGTGCTAATTTCAAGCGATGAAGAGTGTGGGGAAGGATCTACTAGATTGTCATTGTCAGAAGACAATCGATTATGCAGAACTGAAGATAGCTGGGAGTCTTCCTACATTATTGATGTGTTGTCTGAATCTGGCATCGATGGCGCTCAACCTGATCCAAATTTTGAATTTTGGCATTCTCTGGAATCCCCTGTAAGTCTCTCAGTGTTTAATGAACTTGAAAAGAGGTACTGTGATTGGACCACTTGTTCAAGGTCTGAAAGACGGTTGCTTTTTGACCGCATAAATTCTGGAATTGTCAAGATCCACAATCAATCCATGAACTTGCAGCCATGGGTGAGCCGTGCAACAACAAATGTTGGTTCTAAACTGATCGAAAATCGGATCCAAGATGGTCTTTTCAGGTTGCTGGGAAGCCAGGGAAAAGTGAAGGATGATGCTTTGGGGAAGGTGTTGGTTAAGGAATCACAGTGGTTGGACTTAGGAGATGAAATTGATGTAATAGGTAGGGAAATTGAGAGATTGTTGTTAGAAGAACTAGTAGCAGAGATAGCTGGTGCATAG 2928 0.4324 MEKSRHRRSPVASRNQPHTLVLPQGSKQVHRQRQFPDLSPDSVSCGGGVADKDSFSFKFGWRSSKQLFGTPIKKLLADEMSQETESKRRNPGVIARLMGLDGLPTNKQQKDSSENPVEKVRNRGTSYDGRSSRRSSKDQQEFKDVFEVSEIPMVESSRYSSHVSANDLRNANEEMSFIEQKFMDAKRLATYQDLQSSRDFHDTLEVLDSNKELLLKYFKRPDSLFKKHLSDLQADPFESHLGHTEAMQLPEIEKYGNEFDWRLDTDTALLSYDKSHQRQHDGYPRQFNRRHVMHSSPRSSKLQSKGKHEQGASPTKIVVLKPNLGKSQSAVRNVSSPCSPHIFQSEHANDTEFSDIRYRDSKMYPQKINLPDTARPLRHNSLESREIAKEITRQMKNSLNNGGCVMLPSSRLRGYAGDDSSCSVSGNESTEESVGTPATCGNSSDLNNCSRRSSHSGESSVSREAKKRLSERWKMAHKSQEIQIISKSSTLAEMLAITDKDVKTTNFDGRFTEERHRNKPAGWVEPLGISSRDGWKDGCIGSLPRSRSLPASSNVFGSPRTIMRNEVLRDDRFRMPKEAIRRERRRGRSHDQRHGVNSRSTRSGHKKSWSMLSSELEGNEFSPSFSAIENKMEINLEEGSPKLDVPTTESLAVTLKDTSVLPDTIVSVANEDADRSCEPSDKVLPETSLVLTKGDNRVADKDNSIQQELSAGSSDGTSDCFQPPVPGLESSCGKDTDQPSPVSVLEPSFTDDLSSSCSECFESLSADLQGLRMQLQLLKLESEGYAEGSVLISSDEECGEGSTRLSLSEDNRLCRTEDSWESSYIIDVLSESGIDGAQPDPNFEFWHSLESPVSLSVFNELEKRYCDWTTCSRSERRLLFDRINSGIVKIHNQSMNLQPWVSRATTNVGSKLIENRIQDGLFRLLGSQGKVKDDALGKVLVKESQWLDLGDEIDVIGREIERLLLEELVAEIAGA* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1275 975 MobiDBLite consensus disorder prediction 274 288 - -
Amo02g1275 975 Coils Coil 761 781 - -
Amo02g1275 975 Pfam Protein of unknown function (DUF3741) 179 223 IPR022212 -
Amo02g1275 975 MobiDBLite consensus disorder prediction 1 47 - -
Amo02g1275 975 PANTHER AFADIN 25 973 - -
Amo02g1275 975 MobiDBLite consensus disorder prediction 708 741 - -
Amo02g1275 975 MobiDBLite consensus disorder prediction 112 141 - -
Amo02g1275 975 MobiDBLite consensus disorder prediction 416 474 - -
Amo02g1275 975 Coils Coil 168 188 - -
Amo02g1275 975 MobiDBLite consensus disorder prediction 574 615 - -
Amo02g1275 975 MobiDBLite consensus disorder prediction 274 314 - -
Amo02g1275 975 MobiDBLite consensus disorder prediction 13 39 - -
Amo02g1275 975 MobiDBLite consensus disorder prediction 457 474 - -
Amo02g1275 975 Pfam DUF761-associated sequence motif 83 107 IPR032795 -
Amo02g1275 975 Pfam Domain of unknown function (DUF4378) 822 971 IPR025486 -
Amo02g1275 975 MobiDBLite consensus disorder prediction 99 141 - -
Amo02g1275 975 MobiDBLite consensus disorder prediction 420 456 - -
Amo02g1275 975 PANTHER AFADIN 25 973 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1275 Amo-Chr2 27026615 27031683 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1275 69 975 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 39.404 2.18e-137 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1275 - - ccaj:109788117 1135.55