Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1259 ATGGGTGTGTACGGAATTATGCTCATTGCTGCTTTGAGTACATTGCTGCTTATCATTTACAGCTGTTCTGATCAAGTTCTCAGTACTAGGGAAAGGAGAATGGCGAAGTCCAGAGAAGCAGCAGCTAGATCTGTAAGGAAGACTTCAAATGCACGACAAAGATGGAAAACTGCAAAAGACGTTGCTAAAAAGAGTGCAAGTGGACTACAAGCTCAACTATCACGAACATTTTCGCGTAAGAAGGACGTGGCAGATCCAGAAAAAGTTAAAATATTGGGTCAAGCAACTTCAGAAACTGATATAGAATTGCTTTCACATTCACACCCTATTACTCCAAACATTGCTCCCAGCTCATCAGCTGTGCAAAAAGAAAAGGCTAAAGAATCCATTGATCCAATGCAGATGATGCATGAAATTGAAAATGACGATAACCTTCACTTAGAAACTAAAACTAGAGATAAAAGTGTTCAAGGCAAAGCTTCTAAGGAAAAGCAACCTGAAACTCATAGCCAGATTTTTAAGTATGCATATGCTCAATTGGAGAAGGAGAAGGCACAGCAACAAGAAAACAAGAATCTTACTTTCTCAGGAGTAGTTAACATGGCTACCAAAGGTGAACCAAGGAAACGGCTGTTAATGGAAATTTCTTTCAAAGATCTAACTCTCATTTTGAAGGTGCAAAACAAACTTATATTGAGATGTGTAACGGGGAAAATTAAACCTGGGCGCATTACTGCTGTCATGGGTCCATCAGGGGCCGGTAAGACAACATTTCTTTCAGCAGTAGCTGGAAAAGCATTTGGATGCAAGATGACTGGTTCAGTTCTTATAAATGGAAAGACTGAATCAATCCATTCCTATAAGAAAATTATTGGTTTTGTGCCACAAGATGACATAGTTCATGGAAATCTGACAGTAGAAGAGAATTTATGGTTCAGTGCACAGTGCAGGCTATCTGCTGACTTGCCGAAAGCAGACAAAGTTCTGGTTGTAGAAAGAGTTATTGAATTCTTGGGCCTTCAATCTGTGCGGAATTCTTTGGTTGGAACTGTAGAAAAACGAGGGATTTCCGGTGGCCAAAGGAAGCGTGTAAATGTTGGACTGGAAATGGTCATGGAACCTTCACTTTTATTGTTAGATGAACCCACATCTGGTTTGGACAGTGCATCATGTCAGCTACTTCTTAGAGCATTAAGACGGGAAGCTCTTCAAGGAGTGAACATATGCATGGTGGTTCACCAACCAAGCTATGCATTGTTCAATATGTTTGATGACTTGATACTTCTGGCGAAAGGAGGTCTTACTGTGTATCATGGACCTGTCAAGAAAGTTGAAGAATACTTTCTAGGACTTGGGATCTGTATTCCGGAGCGGATCAATCCTCCTGATTACTTTATCGACATTTTGGAGGGCTTAGTAGAACCTGGTGGAAGCTCGGGAGTCAGTTATAAAGACCTGCCAGTTAGATGGATGCTTCATAATGGATACCCAGTACCTCTTGATATGCAGAAGAATGCAGCGAAATTTGGTAACTTAACTCCAAATCCAGCTAACGAAACTGATCCCAATGGCTCTGAACATGACGACAGAAGCTTTGCCGGAGAACTATTGCATGATGTTAGACACGTCGTGGAATTGGAGGGGGAGAAGATACTATTCAACTTTTTGAAATCCCAGGATTTATCTAACCGGAAAACTCCTGGGATATTCAAGCAATACAAGTACTTCCTTATACGGATTGTGAAGCAGCGACTAAGGGAGTCCAAAATCCAAGCTATAGATTATCTAATATTATTACTTGCTGGAGCTTGCTTAGGAGCGCTGAGTAGAGGAAATGATCAGAAGTTTGGTGGAGATGGATACATCTATACAGTGATTTGTCTCTTTTATGTAAAATTGCGGCCTTGA 1908 0.4083 MGVYGIMLIAALSTLLLIIYSCSDQVLSTRERRMAKSREAAARSVRKTSNARQRWKTAKDVAKKSASGLQAQLSRTFSRKKDVADPEKVKILGQATSETDIELLSHSHPITPNIAPSSSAVQKEKAKESIDPMQMMHEIENDDNLHLETKTRDKSVQGKASKEKQPETHSQIFKYAYAQLEKEKAQQQENKNLTFSGVVNMATKGEPRKRLLMEISFKDLTLILKVQNKLILRCVTGKIKPGRITAVMGPSGAGKTTFLSAVAGKAFGCKMTGSVLINGKTESIHSYKKIIGFVPQDDIVHGNLTVEENLWFSAQCRLSADLPKADKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLLLDEPTSGLDSASCQLLLRALRREALQGVNICMVVHQPSYALFNMFDDLILLAKGGLTVYHGPVKKVEEYFLGLGICIPERINPPDYFIDILEGLVEPGGSSGVSYKDLPVRWMLHNGYPVPLDMQKNAAKFGNLTPNPANETDPNGSEHDDRSFAGELLHDVRHVVELEGEKILFNFLKSQDLSNRKTPGIFKQYKYFLIRIVKQRLRESKIQAIDYLILLLAGACLGALSRGNDQKFGGDGYIYTVICLFYVKLRP* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1259 635 MobiDBLite consensus disorder prediction 38 80 - -
Amo02g1259 635 Gene3D - 213 448 IPR027417 -
Amo02g1259 635 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 215 456 IPR003439 GO:0005524
Amo02g1259 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 446 IPR027417 -
Amo02g1259 635 CDD ABCG_EPDR 213 439 - -
Amo02g1259 635 ProSitePatterns ABC transporters family signature. 356 370 IPR017871 GO:0005524
Amo02g1259 635 MobiDBLite consensus disorder prediction 145 168 - -
Amo02g1259 635 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 2 628 - -
Amo02g1259 635 SMART AAA_5 241 433 IPR003593 -
Amo02g1259 635 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 628 - -
Amo02g1259 635 Pfam ABC transporter 234 384 IPR003439 GO:0005524
Amo02g1259 635 Pfam ABC-2 type transporter 413 628 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1259 Amo-Chr2 26172856 26177831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1259 231 416 Calmodulin-binding Proteins AT2G36910 29.843 1.21e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1259 - - gmx:100783798 952.584