Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1239 ATGGAGAGTAGAAGTAATTGGTACGAAAGGTCAAAGCCATTCATAGCTGTTACTTTTCTTCAGTTTGGATTTGCAGGCATGGATGTTCTATCCAAAGCTGCTATGAACAAAGGGATGAGCAACTACGTCCTCGTCGTCTATCGCCACCTCGTCGCCTTCTTCGCCATAGCTCCTTTTGCTCTTTTCCTTGACAAGAAAGTGAGGCCTAAATTGACATTTTCAATCTTCATAAAGATAGTGGCACTCAGCATCCTAGAGCCAGTTATTGATCAGAACTTGTATTTTTTGGGGATGAAGTACACAACAGCAACTTTTGCTGCTGCCATGACCAACATGCTTCCTGCCATTACCTTCTTCATGGCTTGCATTCTTAGACTAGAGAAGATTAAAATAAAAAGTATTCGTAGCATAGCAAAGGTGGTTGGAACTCTAGCAACAGTTTCTGGTGCCATGGTGATGACACTGTTGAAAGGGCCAATTATTGAGCTTTTTGGAAGACATGGAGGCAGTAACCACAATCTTCATCACGATGCTGATGAAAATACTCAACATGCAATAAAAGGGTTTATTATGATCACAATAGGCTGTTTTAGTTGGGCCTGTTTTGTGATCCTCCAAACTATAACCCTTGAAGCCTACCCTGCTGAGCTCTCTCTTACAGCTTGGATATGCATTTTGGGAGCAGCTGAAGGTGCTGCAGTTGCTATGATTATGGAAAGAGCCAACCCTTCTGTTTGGTATCTGAAATGGGATATGAAATTGCTTGCTGTTGTCTACAGTGGCATAGTGTGTTCAGGACTGGCTTATTACATGCAAGGATTGGTGTTGAAAACAAGAGGCCCAGTCTTTGTAACAGCATTTAATCCCCTCTGCATGGTAATTGTTGCTATTATGGGCTCCCTCATTCTAGCAGAGAAACTATTTCTTGGCAGGTTGATTGGTGCCATTGTCATTGTTTTGGGCCTGTACCTTGTAGTGTGGGGTAAAAGCAAAGATTACAAGCCACCAAGTAATGAACCTGTATTGCCAGCTAAACAAGTTACAGAGGAAGCCAACACCAAAAAGGAACATTGTAATCACCACCACATTGCCATCAGTAATTTAAGAGCTGGAATCACAACACTAGAAGAACAAGCATGA 1140 0.4211 MESRSNWYERSKPFIAVTFLQFGFAGMDVLSKAAMNKGMSNYVLVVYRHLVAFFAIAPFALFLDKKVRPKLTFSIFIKIVALSILEPVIDQNLYFLGMKYTTATFAAAMTNMLPAITFFMACILRLEKIKIKSIRSIAKVVGTLATVSGAMVMTLLKGPIIELFGRHGGSNHNLHHDADENTQHAIKGFIMITIGCFSWACFVILQTITLEAYPAELSLTAWICILGAAEGAAVAMIMERANPSVWYLKWDMKLLAVVYSGIVCSGLAYYMQGLVLKTRGPVFVTAFNPLCMVIVAIMGSLILAEKLFLGRLIGAIVIVLGLYLVVWGKSKDYKPPSNEPVLPAKQVTEEANTKKEHCNHHHIAISNLRAGITTLEEQA* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1239 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 143 - -
Amo02g1239 379 PANTHER WAT1-RELATED PROTEIN 9 338 IPR030184 GO:0016021|GO:0022857
Amo02g1239 379 PANTHER WAT1-RELATED PROTEIN 9 338 - -
Amo02g1239 379 Pfam EamA-like transporter family 22 141 IPR000620 GO:0016020|GO:0016021
Amo02g1239 379 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
Amo02g1239 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1239 Amo-Chr2 24863155 24867173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1239 4 367 Nodulin-like Gene Family AT2G37460 60.434 8.31e-164 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1239 - - ahf:112727266 718.768