Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1238 ATGGTGAACCGCATGACTGCGATCACGGCACAACAAAATCGTCAAAAATCCGCTCTCACCGCTTCTTCTTCAGATCTCGCCGCATTTCCTCGTCCGTACAATCGCCGGCAATTTTTTCCGGCAATMTTTCGCCGGAAACTTCATCCATTCTCSGCCACCGCTGATCGAGTATCCCCTGAGGGAATATTGCGTTGCAAAGAGAGTATGGCACACTGGRATTTCYGTGATTCTTTCCCCAATCAAGCATTTTGGATGGCAAAGGATCCTGGAAGTTTGAATGATGGTGACATGACATGTGACGAATCTTCTAGAATTGAGTCCAAGAGATCTCATCAATGGTTCATGGATGGTCCTGAAGTGGATGTATTTCCCAATAAGAAACAGGCAGTAGTGCCCCCAAACAATTTACTGTCAGGAATGCTTAACTCCAATCTTTCTTCATGGGGGAATTCCTCAAGTTTCCAATCCTTAACCGATGATTTCACTGCACAATTGTTTGACCCAGATACGGCTACTACCAATCATGGGGATGCAAATATTTCATCTCTTAGCATGGACAATAAGTCAGGTGGTGAGAGAAAGGATAGCATGAATCCCTTCGGGAGTGGTTCATCATTTGGTTTATCTATGTCCTGTACATTGGATGATCCTCGTTTAGCTTTCAATTATGATGGAATTAGAAAAATTAAAGTTAATGAAGTGAAGGAATCTCATAGTGTCATGTCTGTCCCTGAAAATAATCCCTATGATAAGGGAGTCAGCAGCACCGTGTTAAATCCTCAAGCATACAGCGCTGATGATAATTCCATATCAACGAATCTTGCTTATACCAAAGGGGATGCTAATATAATATCAATGGATGACCCGTACAGCAGGACAGATAACAATTTAATGTCAGTGGTTCAATCTCATAACAAGGGAGGGGATGGCTTATCTATCCATCAAACTTACAAAGATATTTGTAATACAATATCAATGGACCAAGGATTTAGCAAGGTGGATAGCAGCATGACATCTATTGCTCAAGCTTATAAGGCCAATGACAATTCTATGTTAAGAGATTACTTATTCGACAAGGTTGAAAATGGCACCATATCAGCGGGACACCCATATGGCATGGGAGGAAACAACATGCCATTTGTTTCACATTCTTATAATAGTGGGGAGAGCACTATCATATCCTTTGGTGGCTGTGATGATGATGATCCAACTCACTCTGGCCTATTCATTTCCAACTATGACATGTTGACGGGTCAAGCACTTCCACAGAAGTTGGAAGCTGTGAATGAGAAAGAGTTTGTCAGATCTAATTCTAATTTACTTCTAAATACAGCTCAGACATCTGCATCTGAAACTGAAAGTGTTTCCAAGACAAAAGAAGAGATAAAAATGTCTAAGAAAGCTACTTCAAACAACTTCCCTTCAAATGTCAGAAGTTTGCTATCCACTGGCATGCTTGATGGTGTCTCTGTAAAGTATAAGGCTTGGTCGCGGGAGAAGGAGCTTCGAGGAGTTATAAACGGTGCTGGGTATTTATGCAGTTGCCAGTCTTGTAATTTTTCCAAGGTTATTAATGCATATGAGTTTGAACGACATGCTGGTTGCAAGACAAAACACCCCAATAATCATATTTACTTTGAGAGTGGGAAAACTATATATGGTGTTGTACAAGAGCTCCGGAGCACTCCACAGAATATGTTATTTGATGTTCTTCAGACAGTAACTGGTTCAGCAATCAATCAGAAGTCCTTCCGCATTTGGAAAGAATCCTTTTTGGCTGCGGCTCGGGAACTCCAGCGCATTTGTGGAAAAGGTGAAGTGAAGTAG 1827 0.4132 MVNRMTAITAQQNRQKSALTASSSDLAAFPRPYNRRQFFPAIFRRKLHPFSATADRVSPEGILRCKESMAHWXFXDSFPNQAFWMAKDPGSLNDGDMTCDESSRIESKRSHQWFMDGPEVDVFPNKKQAVVPPNNLLSGMLNSNLSSWGNSSSFQSLTDDFTAQLFDPDTATTNHGDANISSLSMDNKSGGERKDSMNPFGSGSSFGLSMSCTLDDPRLAFNYDGIRKIKVNEVKESHSVMSVPENNPYDKGVSSTVLNPQAYSADDNSISTNLAYTKGDANIISMDDPYSRTDNNLMSVVQSHNKGGDGLSIHQTYKDICNTISMDQGFSKVDSSMTSIAQAYKANDNSMLRDYLFDKVENGTISAGHPYGMGGNNMPFVSHSYNSGESTIISFGGCDDDDPTHSGLFISNYDMLTGQALPQKLEAVNEKEFVRSNSNLLLNTAQTSASETESVSKTKEEIKMSKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREKELRGVINGAGYLCSCQSCNFSKVINAYEFERHAGCKTKHPNNHIYFESGKTIYGVVQELRSTPQNMLFDVLQTVTGSAINQKSFRIWKESFLAAARELQRICGKGEVK* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1238 608 PANTHER AUTOIMMUNE REGULATOR 80 607 - -
Amo02g1238 608 MobiDBLite consensus disorder prediction 168 201 - -
Amo02g1238 608 PANTHER PROTEIN, PUTATIVE-RELATED 80 607 - -
Amo02g1238 608 MobiDBLite consensus disorder prediction 168 187 - -
Amo02g1238 608 Pfam Tify domain binding domain 504 559 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1238 Amo-Chr2 24859049 24862722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1238 462 591 PHD Transcription Factor Family AT3G53680 56.923 2.37e-44 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1238 - - mtr:MTR_1g067750 669.848