Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1124 ATGGCTACACAGGGAAAAGTAATCACCTGCAAAGCTGCTGTGGCTTGGGAACCAAACAAGCCATTGAGTGTTGAGGATGTTGACGTGGCACCACCGCAGGCTGGAGAGGTCAGAATCAAAATTCTCTACTCTGCTCTCTGTCACACAGATGCTTATACTTGGAGTGGCAAGGATCCAGAAGGTCTATTCCCCTGTATACTTGGTCATGAGGCTGCTGGGATTGTGGAAAGTGTTGGCGAAGGTGTTACTTCAGTTCAGCCTGGAGATCATGTCATACCCTGCTACCAAGCTGAATGTGGAGACTGCAAGTTCTGCAAATCCGGCAAAACAAACCTCTGCGGCAAGGTTCGTTCGGCCACCGGAGTTGGCGTCATGCTGAGCGATCGCAAGAGTCGTTTCTCCGTCAATGGAAAGCCTATCTATCATTTCATGGGAACTTCCACATTTAGTCAATACACTGTTGTTCATGATGTTAGTGTGGCTAAGATTGATCCCAATGCACCTTTGGACAAAGTTTGTCTTCTTGGATGTGGGGTTCCAACTGGCCTTGGAGCTGTTTGGAACACAGCAAAGGTGGAAGCAGGTTCAATTGTTGCTGTTTTTGGCCTTGGAACTGTTGGTCTTGCTGTTGCGGAGGGTGCAAAAGCTGCCGGTGCATCACGGATTATTGGCATAGATATCGATCGCAATAAGTTTGAAAGAGCAAAGAATTTCGGAGTCACAGAGTTTATCAATCCAAAGGAGCATGAAAAGCCAATTCAGCAGGTCATAGCTGATCTCACAGATGGTGGAGTTGATTACAGCTTTGAGTGCATTGGAAATGTCTCGGTGATGAGAGCTGCTTTGGAATGCTGCCATAAAGGCTGGGGTACATCAGTAATTGTAGGTGTTGCAGCATCAGGTCAAGAAATATCGACTCGGCCCTTCCAGTTGGTGACCGGGCGAGTCTGGAAAGGAACAGCTTTCGGAGGCTTCAAGAGCAGGTCACAAGTACCTTGGCTTGTTGACAAGTACATGAAGAAGGAAATCAAGGTTGATGAGTACATTACACACAGTTTGAACCTTGCTGAGATTAACAAAGCATTTGACCTTTTGCATGAAGGAGGGTGTCTCCGTTGTGTTCTTGCATTGCATGTATGA 1140 0.4693 MATQGKVITCKAAVAWEPNKPLSVEDVDVAPPQAGEVRIKILYSALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTSVQPGDHVIPCYQAECGDCKFCKSGKTNLCGKVRSATGVGVMLSDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPNAPLDKVCLLGCGVPTGLGAVWNTAKVEAGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDRNKFERAKNFGVTEFINPKEHEKPIQQVIADLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHSLNLAEINKAFDLLHEGGCLRCVLALHV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1124 379 SUPERFAMILY GroES-like 2 198 IPR011032 -
Amo02g1124 379 Gene3D - 13 372 - -
Amo02g1124 379 TIGRFAM adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 10 376 IPR014183 GO:0006069|GO:0008270|GO:0051903
Amo02g1124 379 Pfam Alcohol dehydrogenase GroES-like domain 35 162 IPR013154 -
Amo02g1124 379 PANTHER ALCOHOL DEHYDROGENASE 3 376 - -
Amo02g1124 379 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 341 IPR036291 -
Amo02g1124 379 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Amo02g1124 379 CDD alcohol_DH_class_III 8 375 IPR014183 GO:0006069|GO:0008270|GO:0051903
Amo02g1124 379 Gene3D - 182 320 - -
Amo02g1124 379 Pfam Zinc-binding dehydrogenase 206 328 IPR013149 -
Amo02g1124 379 PANTHER S-(HYDROXYMETHYL)GLUTATHIONE DEHYDROGENASE 3 376 - -
Amo02g1124 379 SUPERFAMILY GroES-like 326 375 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1124 Amo-Chr2 19261303 19266112 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1124 10 331 Monolignol Biosynthesis Gene Families AT1G72680 25.994 1.42e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1124 K00121 - gmx:100793008 721.465