Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1108 ATGGTTGCAAAATTTGAGGGTAGAGCTTATCTCGCTTCCTTTGTTGATGCTGTTTTGAACAAGCTGTCTTCTGTCAACTCAACCCCAATAGCAAGGAAGCTAGCTGACCAGAAGTTGCTTCAAAAGTTGAAGGCATGTCTCCGTGCCGTTCGACCTGTGCTTGATGATGCTGAGCAGAAGCAGATCAAAGACCAAGAAGTGAAGAAGTGGCTTGTTGATCTCCAAGATTCTCTCTATATGGCTGATGACTTGCTTGATGAACTCTGTACTAAAGCTGCCACTGCCACTCCCATTCAAAGGGATCCAGGTAACTCTTCTTCCTGGTCTCACTATGTTGATTCAATCGTGGAATACTGTGATGTTGATGAGATGGGGGTAGTAAATAGCACGCAAGACATAGTTGATAAACTGGAGTCTATTGTTGAAGAGAAAGATGATCTTGGTCTAAAAGAAGAGATTGCCAAAGATCTGGGGGACATGTCATGGAGAATTCAATCATCTCTAGTTGAAAGTTCTGAGATATTTGGAAGGGATAATGACAAAGAAGCCATCATAGAATTGTTGTTAGATGATACCTGTGATGCTAACATATCTGTGATTCCCATTGTGGGAATGGGCGGAGTTGGAAAAACTACCTTGGCTCAGTTGGTTTACAATGATGTCAGAGTGGAGAGGAAATTCGACACTAGAGCATGGGTGTGTGTTTCCGACCAATTTGACATTGCTAAGGTTACAAAGACCTTAATAAAAGCAGCAGGATCTAGTTCTTGTAACGAGGATGATTTGAGTTTACTTCAAACTGGATTGAAGGATAAGTTAATGGGGAAGAAATTCTTAATTGTTTTGGATGATGTGTGGATTGATAATTCCAGAAACTGGAAAAGTCTTCAAAAACCTTTTCAATATGGGAAAAAGGGAAGCAAGGTTATTGTAACAACTCGAAATGATAATGTTGCCGATGTAGTGAAAACTATTTCAGCATACAAGCTTGGTTTATTGTCAGAGAAAGATTGTTGGTCACTTTTTGTGAAACGTGTATTTCTTTCTACTGCATCGAAGGAGTATTCAACTCTAGAATCGGTTGGTCGAGAACTTGTCAAAAAGTGCAAAGGGCTACCTTTGGCGGTAGAGGCCCTTGGTTCCTTATTACGTACAATAAACTATGATGAAAGGGATTGGGATAGTGTATTGAAAAGTGAACTATGGGAAGTTTTTGAAGATCAGAATGACGAGATTATTCCTGCCCTAAAAATTAGCTATCATTACCTTCCTTCAAATCTAAAGCGATGCTTTGTTTATTGTTCTTTGTTTCCAAAGGATTTTGAATTTGATAAAGATGAGCTGGTCTTGCTATGGATGGCAGAAGAACTTTTACATCCAAAAGGAAAAAAGACTCTGGAAGAAACTGGTTGTGAATATTTCGATCAATTGGTTGCTAGATCCTTTTTTCAGTCCTCTAGCACTGATGACAGCTTCTATGTGATTCATGATATCATGCATGATTTGGCAACAATTTATGCTGGAGAATTCTATTTTAGAGCTGAAAAACGTGAAGAAAACATCGGGATCAGCAATAAAACCCGTCATTTATTGCATAACTCAAGAGGAAACTATCCCTTCTCGCAACTAGTGGAAGCTTGTGGTAAGGTAAAAGATGTGAGGACATTTCTTGAAATAAATTTGGGTCGAATGGATCCGTTCAGTATGGAAAATGCTCCTCATGTCTTTGTATCAGAGTTGAAGTGCTTAAGAGTTTTGTCATTTAATACCATTCCTCTTCATTCATTACCTGATTCAGTAGGTGAATTGATTCATCTGCGTTATTTGGATCTCTCATGTACACGTATAAAAATATTGCCTGAGGAATTGTGTAATTTGTACAATCTCCAGACTTTGAAGTTGAAGGATTGTTATTTACTAAAGAAGCTACCCAACAATATGCAAGATCTTGTAAATTTACGTCATCTTGATATTCAAGGAGCTGATCTCGAAGAGATGCCAAAAGGAATAAGCAAAATAAAGGATTTGCAGTTTTTAAGTGATTATGTTGTCGGCAAGCATGCAGAGGATAATGGTATTAAAGAATTGGGAGCTCTTGCAAATATTCATGGGACACTTCGTATTTCCCAATTAGACAATGTCATTGATGGTGATCAAGCTTCGGGGGCAAGAATTGCTGGGAAGAAGAACATTAGGGGTCTACGTTTGAGTTGGTCATCAAACAACCATATTGTTGATTCTCACGATATACTCAACAATTTAAGGCCTCACACAAACTTGAGAGAGCTATCAATCAATGACTACAAGGGTCAAACATTTCCAAATTGGCTAGGACATTCTTCCTACAGAAACATGACCAAAATCTACTTGAATGGCTGCAGCAATTGTCTTGAGCTTCCTTCACTTGGACAGCTACCCTCTTTGAAGCACTTGTTTCTCAGCGAGTTTTTCAAGTTAACGCGCATCGGTGCCGAGTTTTACAATTCTTCTTCTTGTGGGGCACCCTTTCCAATGCTTGAAACTCTGAGTTTTTATCACATGTATAACTGGGAGGAGTGGCTTTCAGTTTCATCTGAGTTTGAGTTGGATGCTTTTCCTCGGCTTAGGGTGCTTACAATGCGATACTGTCCTAAGTTAAGGGGAGATTTGCCCATCCAACTACCTGCTTTGGAAAGCCTTTGCATTCGTCACTGTGACCAACTTGCTTTTACTCTTCCAAAAGCAGATGCAATGCTAGAGCTATCTGTTGAAGGAACCCAACGAGTGGAGGCGGTGTTTGAGGCCATTGGACGCAACCAACTAAACTGTCTACAATCTTTAAGCATCTCAATATGTTATTCGTCCATATCATTTCCCGGAGCATGTTTGCCCTCTGCATTGCAAAACTTGGACATTCACCGTTGTCCGTATCTAGAGTTCCCAATGCCGGCGCAAGAGCAGCAGCACGAGTCATTGCAATCGTTATCAATATCCAGCAGTTGTTGTTCACTCATGTCCTTCCCTTTGGCAAGCTTTCCAAATCTAACAAAAATTACAATTTCATCCCTTAAAAATATGAGGTCTCTTGAGGAATCAGATCCAACTGCTGCTTCAACTTCAAATCTCCGCTCTTTACACATTGACAACTGCCCTAGTTTTGAGTCTTTCCAGATGGTTGCACCCCATCTAGAATATCTCATCCTAAGAAATTGCCCAGAAATTGAATCATTCTTCGACGGGGGTTTGCCACCTAACCTGAGAGAGCTTGAAATCCAGAGTTGCAAGAAGCTGGTGATGTACCTAGCATCCATGGACTTGTGTGATCACTGTCTTACACATCTTGACATCGAACATCCTTATGATAACATCAATTCCTTTCCCATGGGCGGTTGCCTGCCGCCCTCCCTTGAGAGACTCTGTCTGCGAAGCTTTCCAACTCTAGAAATCTTGGACTGCAAGGGACTTGACAATCTCCAGAAGCTATTGATAGATCATTGTCCCAACCTCCAGGATGTTGCGGGGAAAAGCTTTCCTTCCTCTCTGTCAATGCTCGGCTTCAGTGGAGGTTCTTTGCTGCGGAGACGGTGGCAGAAGAAGGACCCGTTAATTTTGTCCAAAATGTCCCACATCCGCAACATCAATGTTGATGGATATTGGATTTCATGA 3645 0.4082 MVAKFEGRAYLASFVDAVLNKLSSVNSTPIARKLADQKLLQKLKACLRAVRPVLDDAEQKQIKDQEVKKWLVDLQDSLYMADDLLDELCTKAATATPIQRDPGNSSSWSHYVDSIVEYCDVDEMGVVNSTQDIVDKLESIVEEKDDLGLKEEIAKDLGDMSWRIQSSLVESSEIFGRDNDKEAIIELLLDDTCDANISVIPIVGMGGVGKTTLAQLVYNDVRVERKFDTRAWVCVSDQFDIAKVTKTLIKAAGSSSCNEDDLSLLQTGLKDKLMGKKFLIVLDDVWIDNSRNWKSLQKPFQYGKKGSKVIVTTRNDNVADVVKTISAYKLGLLSEKDCWSLFVKRVFLSTASKEYSTLESVGRELVKKCKGLPLAVEALGSLLRTINYDERDWDSVLKSELWEVFEDQNDEIIPALKISYHYLPSNLKRCFVYCSLFPKDFEFDKDELVLLWMAEELLHPKGKKTLEETGCEYFDQLVARSFFQSSSTDDSFYVIHDIMHDLATIYAGEFYFRAEKREENIGISNKTRHLLHNSRGNYPFSQLVEACGKVKDVRTFLEINLGRMDPFSMENAPHVFVSELKCLRVLSFNTIPLHSLPDSVGELIHLRYLDLSCTRIKILPEELCNLYNLQTLKLKDCYLLKKLPNNMQDLVNLRHLDIQGADLEEMPKGISKIKDLQFLSDYVVGKHAEDNGIKELGALANIHGTLRISQLDNVIDGDQASGARIAGKKNIRGLRLSWSSNNHIVDSHDILNNLRPHTNLRELSINDYKGQTFPNWLGHSSYRNMTKIYLNGCSNCLELPSLGQLPSLKHLFLSEFFKLTRIGAEFYNSSSCGAPFPMLETLSFYHMYNWEEWLSVSSEFELDAFPRLRVLTMRYCPKLRGDLPIQLPALESLCIRHCDQLAFTLPKADAMLELSVEGTQRVEAVFEAIGRNQLNCLQSLSISICYSSISFPGACLPSALQNLDIHRCPYLEFPMPAQEQQHESLQSLSISSSCCSLMSFPLASFPNLTKITISSLKNMRSLEESDPTAASTSNLRSLHIDNCPSFESFQMVAPHLEYLILRNCPEIESFFDGGLPPNLRELEIQSCKKLVMYLASMDLCDHCLTHLDIEHPYDNINSFPMGGCLPPSLERLCLRSFPTLEILDCKGLDNLQKLLIDHCPNLQDVAGKSFPSSLSMLGFSGGSLLRRRWQKKDPLILSKMSHIRNINVDGYWIS* 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1108 1214 Pfam NB-ARC domain 178 421 IPR002182 GO:0043531
Amo02g1108 1214 SUPERFAMILY L domain-like 495 903 - -
Amo02g1108 1214 Gene3D Ribonuclease Inhibitor 542 916 IPR032675 -
Amo02g1108 1214 Gene3D - 160 327 IPR027417 -
Amo02g1108 1214 Gene3D - 419 505 IPR036388 -
Amo02g1108 1214 Gene3D - 332 418 IPR042197 -
Amo02g1108 1214 PANTHER OS05G0414200 PROTEIN 23 950 - -
Amo02g1108 1214 PANTHER DISEASE RESISTANCE PROTEIN RP 23 950 IPR044974 GO:0006952
Amo02g1108 1214 Gene3D Ribonuclease Inhibitor 917 1181 IPR032675 -
Amo02g1108 1214 PRINTS Disease resistance protein signature 199 214 - -
Amo02g1108 1214 PRINTS Disease resistance protein signature 272 286 - -
Amo02g1108 1214 PRINTS Disease resistance protein signature 369 383 - -
Amo02g1108 1214 PRINTS Disease resistance protein signature 624 640 - -
Amo02g1108 1214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 434 IPR027417 -
Amo02g1108 1214 SUPERFAMILY L domain-like 933 1185 - -
Amo02g1108 1214 Pfam Rx N-terminal domain 14 95 IPR041118 -
Amo02g1108 1214 Gene3D - 15 121 - -
Amo02g1108 1214 SMART LRR_typ_2 650 673 IPR003591 -
Amo02g1108 1214 SMART LRR_typ_2 603 626 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1108 Amo-Chr2 18951339 18955454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1108 196 861 WRKY Transcription Factor Family AT5G45050 22.421 8.26e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1108 - - adu:107475166 1700.64