Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1107 ATGGCTACTCTCACTTGTTCCGTAGCTGAGCTTCAATCACTTCTTATCAACAATGGAGGCAACACTTCCATGGCAACAGAAACTGCCAAATACATATGTGGAAGATTTGATGCTATCTCTAACAACTTTCTTGACACAAACCATGCAGTGGACAACACATACCTTCTCTTCTCTTCCTACCTTGTCTTTGCCATGCAGCTTGGCTTCGCCATGCTGTGTGCCGGATCGGTTCGCGCCAAGAACACCATGAACATAATGCTTACTAATGTCCTTGACGCCGCCACTGGCGGCATCTTCTACTATCTTTTTGGCTTTGCCTTTGCCTTTGGCTCCTCGTCCAACGGTTTCATCGGCGAACATTTCTTTGGCCTAACGCAGTTCCCGTCCGAGTCCTTCGACTATGCAAACTTTCTTTTCCAATGGGCTTTCGCCATCGCCGCCGCCGGCATAACAAGTGGATCCATAGCTGAGAGGACACAATTTGTTTCCTATTTGATATACTCTTCGTTCTTGACGGGGCTAGTTTACCCGGTCGTTTCGCATTGGTTTTGGTCATCGGACGGTTGGGGAAGCCCTGCAAGGGTTGATCCAGAAACACTGCTGTTTGGTTCGGGAGTCATTGATTTTGCTGGATCAGGTGTTGTTCACTTGGTTGGTGGTGTTGCTGGATTTTGGGGTGCCTTTATTGAAGGACCAAGGATTGGAAGGTTTGATCATGAGGGAAAAGCTGTGGCTATGAGGGGACATAGTGGTACTTTGGTTGTTTTGGGAACCTTCTTGTTGTGGTTTGGTTGGTACGGATTTAACCCTGGCTCGTTTCTCATCATCTCCAAGGCTTATGGTAAAAGTGGTTCTTTCTATGGACAATGGAGTGCAATTGGTAGGACTGCTGTGACAACAACACTTGCAGGTTGCTCAGCAGCATTGACAACTCTTTTTGGCAGACGTTTGCAAACTGGTCACTGGACTGTCACAGACGTTTGCAATGGCTTGCTTGGCGGATTCGCCGCCATCACTGCCGGCTGCTCTGTAGTAGACCCTTGGGCTGCAGTGATATGCGGATTCTTCGCGGCTTGGGTGTTGATTGGATGCAACATTCTAGCTGAGAAATTCAAGTATGATGATCCCTTGGAAGCCTTCCAACTCCATGGTGGATGCGGCGTCTGGGGGATCATTTTCACTGCGTTGTTCGCGAAAAAGGAGTATTTGAATGAGGTCTTTGGAGGGCCAATTGATAGGCCTTATGGTTTGCTAATGGGAGGAGGTGGAAGGCTTTTGGCTGCACATGTTATTCAGATTTTGGTTATTGTTGGTTGGGTTAGTGTTACAATGGGAACGTTGTTCTTTGTTTTGCACAAGTTGAAGCTTTTGAGGATATCATCTGAAGAGGAGATGGAAGGTTTGGACTTAACTAGCCATGGTGGAATGGCTTATGAGTATCATCATGGTGAACTTGAGCTTCTACAGAAACGTTCGCTTGAAGGAACAAGGATAGATCCTTAG 1503 0.4704 MATLTCSVAELQSLLINNGGNTSMATETAKYICGRFDAISNNFLDTNHAVDNTYLLFSSYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFYYLFGFAFAFGSSSNGFIGEHFFGLTQFPSESFDYANFLFQWAFAIAAAGITSGSIAERTQFVSYLIYSSFLTGLVYPVVSHWFWSSDGWGSPARVDPETLLFGSGVIDFAGSGVVHLVGGVAGFWGAFIEGPRIGRFDHEGKAVAMRGHSGTLVVLGTFLLWFGWYGFNPGSFLIISKAYGKSGSFYGQWSAIGRTAVTTTLAGCSAALTTLFGRRLQTGHWTVTDVCNGLLGGFAAITAGCSVVDPWAAVICGFFAAWVLIGCNILAEKFKYDDPLEAFQLHGGCGVWGIIFTALFAKKEYLNEVFGGPIDRPYGLLMGGGGRLLAAHVIQILVIVGWVSVTMGTLFFVLHKLKLLRISSEEEMEGLDLTSHGGMAYEYHHGELELLQKRSLEGTRIDP* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1107 500 PANTHER AMMONIUM TRANSPORTER 1 485 - -
Amo02g1107 500 TIGRFAM amt: ammonium transporter 51 478 IPR001905 GO:0008519|GO:0016020|GO:0072488
Amo02g1107 500 PANTHER AMMONIUM TRANSPORTER 1 485 - -
Amo02g1107 500 Gene3D Ammonium transporter AmtB like domains 32 493 IPR029020 -
Amo02g1107 500 ProSitePatterns Ammonium transporters signature. 208 233 IPR018047 GO:0008519|GO:0016020|GO:0072488
Amo02g1107 500 SUPERFAMILY Ammonium transporter 48 459 - -
Amo02g1107 500 Pfam Ammonium Transporter Family 55 478 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1107 Amo-Chr2 18948380 18950430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1107 4 500 Inorganic Solute Cotransporters AT4G13510 71.026 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1107 K03320 - jre:109020544 764.607