Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1085 ATGGAGGGTTCAGATTTTCTAAATAGTATCTCAGCTTCAATATTATCAAAACATTTCTCGGACTCTGAGATTCTATCCGACACGATCCTAGGATTGCCATTTTTGGAACTTGCTGCAATCTGCGTGAACCTTACCCTTGTTGTGTTGTTCCTCTTTGTTGTATCCGTGAGGAAGATTTGTGTGTGCGAAGGTCGGATTCGAATTAATAAGGAAAACGGCATCGCCACCAGCACCACCACCATTAATGGAAACAATGGCATTGATGGTGAAGTTCAAATAGGTTCAATGTTCAAGTTCTCAGTGTTCTCTTGTTTCTATGTCCTTTTTGTTCAAGTTGTGGTGCTTGGTTTCGATGGGGTTTCTTTGATTTCAAATGGGGCTAATGGAAAACATGTGAACTGGTTCCTTCTATTTGTGCCATCTGCACAAGGTTTGGCTTGGTTTGTGTTGAGCTTCTCAGCATTGCAATGCAAGCTCAAAGTTTCTCATAAGTTCCCTTTTCTCTTGAGGGTTTGGTGGTTATTGTCCTTTGTTATCTGTTTGTGCAATTTGTATGTTGACGTGAGAGGTCTTTATATGGAAGGTCCCAAATACCTTTCCACTCGCGTAGTTGCAAATTTCGCCGTCGCTCCGGCGCTTGCATTCTTGTCTGTGGTTGCAATTAGGGGTGTTACCGGTATACAAGTTTGTGTGGACCCTGATCTTCAGGAGCCATTGCTTGTTGAAGAGGAGACGGGTTGTCTCAAGGTTACACCATATAAAGATGCCGGAATTTTCAGCTTGGCCACGCTTTCGTGGCTGAATCCGCTTCTTTCCGTTGGTGCAAAGAGACCCCTCGAGCTTAAGGACATTCCCCTTGTAGCACCCAAGGATAGAGCCAAGACTAGTTATAAGATTTTGAACTCAAATTGGGAGAGATTGAAGGCTGAAAACCCCTCTAAGCAGCCTTTGTTAGCTTGGGCGATTCTCAAGTCGTTTTGGAAGGAAGCAGCCGTGAATGCCATCTTTGCAGGTCTGAATACTTTGGTAGCTTATGTTGGTCCATATATGATAAGTTACTTTGTTGATTACTTGGGTGGCATAGAGACTTTTCCTCATGAAGGCTATGTCCTCGCGGGAATATTCTTTGCTGCAAAGCTTGTGGAAACGCTGACGACTCGGCAGTGGTATCTAGGAGTGGACATCTTGGGTATGCATGTCAGATCGGCTCTAACGGCGATGGTGTACCAAAAGGGGCTAAGGCTGTCGAGCTCAGCCAAGCAAAGTCACACAAGTGGGGAGATTGTCAATTACATGGCTGTTGATGTTCAGAGGGTAGGGGATTACTCTTGGTATCTTCACGACATGTGGATGCTTCCGATGCAGATTGTTCTTGCTCTTCTAATTTTGTACAAGAGTGTTGGAATAGCTGCCATTGCAACATTGATTGCTACAATAATTTCCATTGTTGTAACTGTTCCTGTGGCTAGAATACAAGAAAATTACCAAGATAAATTGATGGCTGCTAAGGATGAAAGGATGAGAAAGACATCAGAGAGTTTAAGGAATATGAGGATTCTCAAGCTACAAGCTTGGGAAGACAGGTATCGTATACAATTGGAGGAAATGCGTGGAACGGAATACAAGTGGCTGAGGAAAGCGCTCTATTCTCAGGCTTTCATAACCTTCATATTCTGGAGCTCCCCGATTTTTGTGTCGGCAGTCACTTTTGCTACTTGCATATTGTTGGGTGGTCAGCTGACAGCAGGCGGTGTCCTTTCTGCCCTGGCTACATTTCGGATCCTCCAAGAACCTCTGAGAAACTTTCCGGACTTGGTGTCAACGATGGCTCAGACAAAAGTTTCGCTTGATCGGATAACTAGTTTTCTGCAGGACGAAGAATTGCAGGAAGATGCAACTATCGTCTTGCCACCAGGCATGACTGACACTGCCGTAGAGATCAAGGATGGTGTCTTCTGCTGGGACCCTTCTTTGTCTAGGCCTACACTGTCAGGAATACATATGAAAGTCGAAAAGGGCATGCGTGTGGCTGTTTGTGGCATGGTTGGTTCTGGGAAATCAAGCTTCCTTTCTTGCATCCTTGGAGAGATTCCTAAGCTTTCGGGTGAAGTTAAAGTATGTGGCACTGCTGCATATGTCTCCCAATCAGCATGGATACAGACAGGAAATATAGAAGAAAATATCCTCTTTGGAAATGCGATGGACAAACCAAGGTACAAGAAGGTTATTCATGCTTGTTCACTGAAGAAGGACCTAGAGCTTTTCTCACATGGAGACCAAACAATTATCGGTGATAGAGGTATAAACCTCAGTGGTGGCCAGAAGCAGCGGGTTCAGCTTGCACGAGCACTTTATCAAGATGCTGATATTTATCTCCTTGATGATCCCTTTAGTGCAGTTGATGCCCACACCGGATCGGATTTGTTCAGGGAGTATGTATTGACAGCATTAGCCAAAAAAACAGTCATTTTTGTGACGCATCAAGTTGAATTTCTGCCTGCTGCTGATCTGATACTGGTCCTTAAAGAAGGACAAATCATACAGGCCGGAAAATATGATGAGCTTCTACAAGCTGGAACAGATTTTAAGACTCTAGTTTCAGCTCATCATGAAGCAATAGAGGCTATGGATATTCCTTCTCACTCAGATGAATCAGATGAAAACATGTCCCCAGATAGATCTATTATGACAGAAAAGAGATCCTCTGCTTCACTCGACATTGATGGTCTAGCAAAGGAAGTGCAAGAGGGATCATCCGATCAGAAGGCAATCAAGGAGAAAAAGGCAAAGCGCTCAAGGAAAAAACAACTTGTTCAAGAAGAGGAGAGGGTTAGAGGTCGTGTGAACATGAAGGTTTACTTGTCGTACATGGCTGCAGCATATAAAGGCTTATTGATTCCGCTCATAATTATGGCACAATCATTATTTCAGTTCCTTCAGATTGCTAGTAACTGGTGGATGGCTTGGGCAAATCCTCAAACTGCTGGAGACGAGCCAAAAGTAACTCCAACTGAGCTTCTTCTCGTGTACATGGCCCTTGCTTTTGGCAGCTCATTGTTTATATTTGTAAGGGCTGTTCTGGTAGCTACATTTGGTCTTGCTGCTGCGCAAAAATTATTTTTCAGCATGCTCAGAAGTATTTTCCGTGCACCAATGTCTTTCTTTGACTCTACACCATCTGGAAGGGTCCTGAATCGGGTTTCTGTTGATCAAAGTGTTGTGGATCTCGACATTCCTTTTCGACTTGGAGGGTTTGCTTCAACAACAATACAGCTCATAGGAATTGTTGCTGTAATGACAACAGTTACATGGCAAGTTTTGCTCCTGGTTATCCCAATGGCTATTGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAACTGGTACGAATTGTAAGCATCCAAAAATCTCCAATAATACATCTTTTCGGTGAATCAATTGCGGGAGCAGCCACCATCAGAGGTTTTGGACAAGAAAAAAGGTTCATGAAGAGGAACCTTTACCTTTTGGATTGTTTTGCACGGCCATTCTTTTGCAGCCTTGCAGCTATTGAGTGGCTATGCTTGCGCATGGAATTACTCTCCACTTTTGTGTTTGCTTTCTGTATGGTACTACTTGTGAGTGTTCCCCATGGAAGTATTGACCCCAGCATGGCTGGACTTGCCGTGACGTATGGCCTGAATTTGAATGGACGTCTATCTCGGTGGATACTTAGCTTTTGCAAACTTGAAAACAAAATTATATCTATCGAAAGGATTTATCAGTACAGCCAAGTTCCTAGTGAAGCACCTGCAATTGTTGATGATTCTCGTCCTCCGTCCTCATGGCCCGAGAATGGAACAATCCAAATAGTTGATTTGAAGATACGATACAAGGAAAATCTTCCATTGGTGCTTCGTGGAATATCATGTACATTTCCTGGTGGGAAGAAGATTGGAATAGTCGGACGTACTGGCAGTGGCAAATCTACTTTGATTCAGGCATTATTTCGATTGGTTGAACCATCCACGGGGAGTATCATTATTGACAACATCAATATTTCAACAATTGGCCTCCATGACCTTCGAAGCCGTCTGAGTATAATACCACAAGATCCAACCTTATTTGAAGGCACAATACGAGGCAATCTTGATCCTCTTGAGGAGCACTCAGATAAAGCGATTTGGGAGGCACTGGATAAGTCTCAGCTTGGAGAGGTTATTCGATCAAAAGGACAAAAGCTTGATACGCCGGTTCTAGAAAATGGAGATAATTGGAGTGTAGGGCAACGACAACTTGTTGCTCTAGGCCGAGCGCTACTTAAACAGTCAAAGATACTTGTACTTGATGAAGCAACGGCATCGGTTGATTCTGCTACTGATAATCTTATCCAAAAGATTATTCGAGAAGAGTTCAGAGACTGCACTGTTTGTACTATTGCACATCGTATTCCTACAGTTATTGACAGTGATCTAGTTCTGGTTCTCAGTGATGGCCGGGTCACAGAATTTGACACTCCATCACGGCTATTAGAGGATAGGTCATCCATGTTCCTAAAGTTGGTAAGCGAGTATTCATCACGGTCGAGTGGCATACCAGATTTCTAA 4596 0.4356 MEGSDFLNSISASILSKHFSDSEILSDTILGLPFLELAAICVNLTLVVLFLFVVSVRKICVCEGRIRINKENGIATSTTTINGNNGIDGEVQIGSMFKFSVFSCFYVLFVQVVVLGFDGVSLISNGANGKHVNWFLLFVPSAQGLAWFVLSFSALQCKLKVSHKFPFLLRVWWLLSFVICLCNLYVDVRGLYMEGPKYLSTRVVANFAVAPALAFLSVVAIRGVTGIQVCVDPDLQEPLLVEEETGCLKVTPYKDAGIFSLATLSWLNPLLSVGAKRPLELKDIPLVAPKDRAKTSYKILNSNWERLKAENPSKQPLLAWAILKSFWKEAAVNAIFAGLNTLVAYVGPYMISYFVDYLGGIETFPHEGYVLAGIFFAAKLVETLTTRQWYLGVDILGMHVRSALTAMVYQKGLRLSSSAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPMQIVLALLILYKSVGIAAIATLIATIISIVVTVPVARIQENYQDKLMAAKDERMRKTSESLRNMRILKLQAWEDRYRIQLEEMRGTEYKWLRKALYSQAFITFIFWSSPIFVSAVTFATCILLGGQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRITSFLQDEELQEDATIVLPPGMTDTAVEIKDGVFCWDPSLSRPTLSGIHMKVEKGMRVAVCGMVGSGKSSFLSCILGEIPKLSGEVKVCGTAAYVSQSAWIQTGNIEENILFGNAMDKPRYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSDLFREYVLTALAKKTVIFVTHQVEFLPAADLILVLKEGQIIQAGKYDELLQAGTDFKTLVSAHHEAIEAMDIPSHSDESDENMSPDRSIMTEKRSSASLDIDGLAKEVQEGSSDQKAIKEKKAKRSRKKQLVQEEERVRGRVNMKVYLSYMAAAYKGLLIPLIIMAQSLFQFLQIASNWWMAWANPQTAGDEPKVTPTELLLVYMALAFGSSLFIFVRAVLVATFGLAAAQKLFFSMLRSIFRAPMSFFDSTPSGRVLNRVSVDQSVVDLDIPFRLGGFASTTIQLIGIVAVMTTVTWQVLLLVIPMAIACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGAATIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSVPHGSIDPSMAGLAVTYGLNLNGRLSRWILSFCKLENKIISIERIYQYSQVPSEAPAIVDDSRPPSSWPENGTIQIVDLKIRYKENLPLVLRGISCTFPGGKKIGIVGRTGSGKSTLIQALFRLVEPSTGSIIIDNINISTIGLHDLRSRLSIIPQDPTLFEGTIRGNLDPLEEHSDKAIWEALDKSQLGEVIRSKGQKLDTPVLENGDNWSVGQRQLVALGRALLKQSKILVLDEATASVDSATDNLIQKIIREEFRDCTVCTIAHRIPTVIDSDLVLVLSDGRVTEFDTPSRLLEDRSSMFLKLVSEYSSRSSGIPDF* 1532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1085 1531 Gene3D - 1268 1520 IPR027417 -
Amo02g1085 1531 SMART AAA_5 1311 1496 IPR003593 -
Amo02g1085 1531 SMART AAA_5 672 853 IPR003593 -
Amo02g1085 1531 Coils Coil 492 512 - -
Amo02g1085 1531 MobiDBLite consensus disorder prediction 877 894 - -
Amo02g1085 1531 CDD ABC_6TM_ABCC_D1 332 619 IPR044746 GO:0140359
Amo02g1085 1531 MobiDBLite consensus disorder prediction 916 938 - -
Amo02g1085 1531 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1285 1519 IPR003439 GO:0005524
Amo02g1085 1531 ProSitePatterns ABC transporters family signature. 770 784 IPR017871 GO:0005524
Amo02g1085 1531 CDD ABCC_MRP_domain2 1283 1503 - -
Amo02g1085 1531 SUPERFAMILY ABC transporter transmembrane region 965 1271 IPR036640 GO:0005524|GO:0016021
Amo02g1085 1531 Gene3D ABC transporter type 1, transmembrane domain 303 628 IPR036640 GO:0005524|GO:0016021
Amo02g1085 1531 Gene3D ABC transporter type 1, transmembrane domain 927 1266 IPR036640 GO:0005524|GO:0016021
Amo02g1085 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 640 867 IPR027417 -
Amo02g1085 1531 MobiDBLite consensus disorder prediction 877 901 - -
Amo02g1085 1531 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 87 1531 - -
Amo02g1085 1531 CDD ABC_6TM_ABCC_D2 966 1260 IPR044726 GO:0140359
Amo02g1085 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1276 1516 IPR027417 -
Amo02g1085 1531 Gene3D - 639 873 IPR027417 -
Amo02g1085 1531 SUPERFAMILY ABC transporter transmembrane region 320 630 IPR036640 GO:0005524|GO:0016021
Amo02g1085 1531 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 334 611 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo02g1085 1531 Coils Coil 924 944 - -
Amo02g1085 1531 Pfam ABC transporter transmembrane region 335 599 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo02g1085 1531 Pfam ABC transporter transmembrane region 977 1208 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo02g1085 1531 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 645 868 IPR003439 GO:0005524
Amo02g1085 1531 CDD ABCC_MRP_domain1 645 845 - -
Amo02g1085 1531 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 968 1238 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo02g1085 1531 Pfam ABC transporter 663 797 IPR003439 GO:0005524
Amo02g1085 1531 Pfam ABC transporter 1302 1450 IPR003439 GO:0005524
Amo02g1085 1531 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 87 1531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1085 Amo-Chr2 17789781 17797866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1085 616 861 Calmodulin-binding Proteins AT2G36910 30.943 4.95e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1085 - - gmx:100781010 2517.65