Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1077 ATGGGTTCTAGGCCTCTGTTGTTACCATCTCCAAGAACTCCAAATAGTATTCAAGAGCTTCCAACCATTCCAGTTTTCTCTGAACAACAAAAGTCAAAGTCAACTTCCTCTGAACACGCAAGCAATGCTGTTATAAACAAAAGCAACTCATCGTCGATCCGCTCCGGCAGCTCCGGAAGGAGCGGCGGCGGCTCCGTCAAGGAAGTGAGTTTCAGCAATTCTTCATCGAAGCCGGTTCGATACGGCTCGTCAAAACGCGGCGGTGGCGGCGAGTCGGAAGGACTCAGCATGTCGCAGAAAGAACTGAGAGACGAAGATGCAAGAATTGTTTACATAAACAACCCGGAGAAGACGAACGAGACTCTTCAGTTCGCAGGGAATTCAATCCGAACCGCGAAATATTCAATCCTCACATTCATCCCTAGAAACCTCTTCGAACAGTTTCACAGAGTTGCGTATATTTATTTTCTCATAATCGCCATTCTCAATCAGCTTCCTCAGCTTGCAGTCTTCGGTAGAGGTGTTTCAATTCTCCCTCTGGCCTTTGTCCTGCTCGTTACCGCCGTCAAAGACGCCTTCGAGGATTGGCGGCGCCACCGCTCCGATAAAGTCGAGAACAACCGGCTAGCGTCGGTTTTGATTAACGGAAGCTTCGTGGAGAAGCCATGGAAGGACATAACCGTCGGCGAAATCGTTAAGATCGCCGCCAACGAAACGATCCCCTGCGATATTGTCCTTCTCTCCACCGCCGATCCTACCGGAGTTGCATATGTTCAGACTATAAATCTTGACGGAGAGTCAAATCTGAAAACTCGCTACGCCAAGCAAGAGACTCAATCCAAACAGAGGTTTGATTTCGGTGGAATAATCAAGTGCGAGAAACCGAATCGGAACATTTATGGATTCCAAGCTAACATGGAAGTTGATGGAAAGAAACTGTCTCTCGCATCATCGAACATTGTGCTTAGAGGATGCGAGCTTAAGAACACAAGCTGGGCTTTGGGAGTTGCTGTTTACTGTGGCAGAGAGACTAAAGCTATGCTCAACAGCTCCGGTGCGCCGTCGAAGAGAAGCCGGCTCGAGACTCGAATGAATTCGGAGATCATCATGCTCTCTTGCTTCCTTGTTGCTTTGTGTACGGTCACGTCCGTTTGTGCTGCGGTTTGGTTGAAGCGCCACAAAGACGAGCTTGATTTGATGCCGTATTACCGGAAGCTGAGCTTCTCCAGTGGAAAACCGAAGAAGTATAAGTATTATGGTTGGTTTTGGGAGATAATTTTCACATTCCTCATGTCAGTTATAGTTTTCCAGGTTATGATTCCAATTTCGTTGTACATTTCGATGGAGCTTGTTCGTGTTGGCCAGGCCTATTTCATGATCAGAGATGATAGAATGTATGATAGGGCTACCAAGTCAAGATTTCAGTGTAGGGCTTTGAATATCAATGAAGATTTGGGGCAGATTAAGTATGTCTTTTCGGATAAAACTGGTACTCTTACTGAGAACAAGATGGAATTCCAGTGCGCCAGCATCTGGGGGGTTGATTACAGTTCGACGAAATCTGGCCTCGAGATTCAACCTGGTGAATACTTCACGCAAGTAGATGGAAAGGTATTGAGGCCAAAGATGAATGTGAAAGTAAATCCAGAGCTTTTGGCATTATCAAGAAGTGGAATTGAGCATAAGGAGGGAAAACGGATCTATGATTTCTTTCTAGCACTGGCAAGCTGCAATACCATTGTTCCTATTATTGTTGATACCCCTGATCATGATGTCAAGCTGATAGATTACCAAGGGGAATCACCAGATGAACAGGCATTGGCATACGCAGCCGCCGCCTATGGTTTTATGCTTATAGAACGAACCTCGGGCCATATAGTCATTGATATTCAAGGAGAAAGACACAGGTTCAATGTCTTGGGTATGCATGAATTCGACAGCGATCGGAAGAGGATGTCAGTTATATTGGGCAGCCCCGACAATTCAGTGAAAATTTTCGTGAAAGGAGCGGATACGTCTATGCTAAATGTGATAGATAAATCATCTAACATGGACATTATAAGAGCAACTGAAGCTCATCTTTACTCTTATTCCTCAATGGGTTTAAGAACCCTTGTGATTGGAATGAGGGATTTAAATGCTTCAGAGTTTGAGCAATGGCACACTGCCTTTGAGGCAGCGAGCACCTCTTTGTTCGGCAGGGCCGCCATGCTTCGCAAGGTTGCTGTCAATGTAGAGAGAAACCTCTGCATCTTAGGCGCATCGGCTATCGAAGACAAGCTTCAGCAGGGTGTGCCGGAATCCATTGAGTCTCTAAGGACAGCTGGAATAAAAGTATGGGTGCTAACCGGAGACAAACAAGAAACTGCTATATCAATTGGATACTCATCAAAGCTTCTAACAAACAGAATGACTCAAATCATAATCAATAGCAAAAATAGAGAGTCGTGTAGAAAGAGTTTGCAAGATGCCATTGTTTCAAACAAGATTGAAGGAGGTTTTGATGCAATGACAAGTCAGATAGCATTGATCATTGATGGTACTAGCCTTGTATATGTTCTTGATAGTGAACTAGAGGAGCAGTTATTTAAACTTGCAAGTAGATGTTCTGTTGTTCTCTGTTGTCGAGTGGCGCCGCTGCAGAAGGCCGGCATAGTTGCCCTTGTTAAGAAGAGGACAGCCGAAATGACGCTTGCCATTGGAGACGGTGCTAATGATGTCTCCATGATTCAAATGGCTGATGTTGGAGTTGGCATCAGCGGACAAGAGGGCCGGCAAGCCGTAATGGCGTCCGATTTCGCCATGGGCCAGTTTAGGTTTATAGTTCCTCTCTTGTTGATTCATGGACACTGGAATTACCAGCGGCTTGGCTACATGATACTCTACAACTTTTATAGAAATGCTGTCCTTGTTCTTGTCCTATTTTGGTATGTGCTCTACACTGCCTTCACTTTAACAACTGCCATAAATGAATGGAGCACCACGTTATATTCAATAATATACAGCTCATTACCAACAATCATAGTTGGTATTCTTGACAAGGATCTTGGAAAAAGGACTCTCCTCAAGTATCCTCAGCTCTATGGGGCTGGGCAGAGAGATGAGGCATACAACAAGAAGCTATTTATTTTGACAATGCTCGACACTTTATGGCAAAGCATGGTAATCTTTTGGGCACCCCTCTTTGCATATTGGAGCACTGATGTTGATGTTGGAAGCATTGGGGATCTCTGGACACTAGCTGTCGTTATTTTGGTAAATTTACACTTGGCCATGGATGTCTTCAGGTGGAATTGGTTGACTCATTTTTCCATATGGGGGTCAATTGTTGCCACTTTCATTAGTGTCATGGTCATTGATGCTATACCCACGTTTCCTGGCTACTGGGACTTCTTTAATGTTGCAAGCACAGGATTGTTCTGGTTATTGTTGCTTGGAATCATCATAACAGCATTGCTTCCTCGTTTCCTTGTAAAATTCATTTGTCAATATTACTTTCCCAGTGACATTCAGATTTCAAAAGAAGCTGAGAAGATTAATGGGAATCAAATTCAAAGAGAAAATTTTGAAAGAGGACAAATAGAAATGCTTCCTATCTCAGATGTCCCACCAAGATGA 3618 0.4428 MGSRPLLLPSPRTPNSIQELPTIPVFSEQQKSKSTSSEHASNAVINKSNSSSIRSGSSGRSGGGSVKEVSFSNSSSKPVRYGSSKRGGGGESEGLSMSQKELRDEDARIVYINNPEKTNETLQFAGNSIRTAKYSILTFIPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAFEDWRRHRSDKVENNRLASVLINGSFVEKPWKDITVGEIVKIAANETIPCDIVLLSTADPTGVAYVQTINLDGESNLKTRYAKQETQSKQRFDFGGIIKCEKPNRNIYGFQANMEVDGKKLSLASSNIVLRGCELKNTSWALGVAVYCGRETKAMLNSSGAPSKRSRLETRMNSEIIMLSCFLVALCTVTSVCAAVWLKRHKDELDLMPYYRKLSFSSGKPKKYKYYGWFWEIIFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIRDDRMYDRATKSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSTKSGLEIQPGEYFTQVDGKVLRPKMNVKVNPELLALSRSGIEHKEGKRIYDFFLALASCNTIVPIIVDTPDHDVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIQGERHRFNVLGMHEFDSDRKRMSVILGSPDNSVKIFVKGADTSMLNVIDKSSNMDIIRATEAHLYSYSSMGLRTLVIGMRDLNASEFEQWHTAFEAASTSLFGRAAMLRKVAVNVERNLCILGASAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNRMTQIIINSKNRESCRKSLQDAIVSNKIEGGFDAMTSQIALIIDGTSLVYVLDSELEEQLFKLASRCSVVLCCRVAPLQKAGIVALVKKRTAEMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFIVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLYTAFTLTTAINEWSTTLYSIIYSSLPTIIVGILDKDLGKRTLLKYPQLYGAGQRDEAYNKKLFILTMLDTLWQSMVIFWAPLFAYWSTDVDVGSIGDLWTLAVVILVNLHLAMDVFRWNWLTHFSIWGSIVATFISVMVIDAIPTFPGYWDFFNVASTGLFWLLLLGIIITALLPRFLVKFICQYYFPSDIQISKEAEKINGNQIQRENFERGQIEMLPISDVPPR* 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1077 1205 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 11 1205 - -
Amo02g1077 1205 Pfam E1-E2 ATPase 210 449 - -
Amo02g1077 1205 Pfam Phospholipid-translocating P-type ATPase C-terminal 928 1168 IPR032630 -
Amo02g1077 1205 SUPERFAMILY Calcium ATPase, transduction domain A 207 346 IPR008250 -
Amo02g1077 1205 SFLD C1.7: P-type atpase like 476 951 - -
Amo02g1077 1205 MobiDBLite consensus disorder prediction 1 101 - -
Amo02g1077 1205 Gene3D - 597 729 IPR023299 GO:0000166
Amo02g1077 1205 SFLD p-type atpase 476 951 IPR044492 -
Amo02g1077 1205 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 422 513 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo02g1077 1205 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 871 986 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo02g1077 1205 Gene3D - 748 940 IPR023214 -
Amo02g1077 1205 PRINTS P-type cation-transporting ATPase superfamily signature 492 506 - -
Amo02g1077 1205 PRINTS P-type cation-transporting ATPase superfamily signature 775 785 - -
Amo02g1077 1205 PRINTS P-type cation-transporting ATPase superfamily signature 900 919 - -
Amo02g1077 1205 SUPERFAMILY Calcium ATPase, transmembrane domain M 123 1167 IPR023298 -
Amo02g1077 1205 SUPERFAMILY HAD-like 479 940 IPR036412 -
Amo02g1077 1205 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 124 1174 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Amo02g1077 1205 MobiDBLite consensus disorder prediction 9 81 - -
Amo02g1077 1205 Pfam Phospholipid-translocating ATPase N-terminal 110 175 IPR032631 -
Amo02g1077 1205 CDD P-type_ATPase_APLT_Dnf-like 126 1060 - -
Amo02g1077 1205 Pfam Cation transport ATPase (P-type) 600 675 - -
Amo02g1077 1205 Gene3D - 183 349 - -
Amo02g1077 1205 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 764 IPR023299 GO:0000166
Amo02g1077 1205 ProSitePatterns E1-E2 ATPases phosphorylation site. 494 500 IPR018303 -
Amo02g1077 1205 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 11 1205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1077 Amo-Chr2 17316755 17322770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1077 67 1205 Primary Pumps ATPases AT5G04930 68.586 0.0 1654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1077 K14802 - gmx:100813836 1830.84