Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1054 ATGCCGTGTTATGCCCCTTCTTTCTGTCCCTACCTGGTAACTCCCCCGTCCACCTCCGTCCACCGCGGTTCCCGTCACCGGAGACCGACCAAACGCAACGTCACCATCCACTACCCAAAAATGTCCCTAAACAACAACGATAACACATCAAACCCTAACCCCTCTTCCTTGCTGACGTCGCTTACCAAACTCCTCTGGGGACAATCACTTCCGCCGGGCCTCCTAGTTTCCACCGCGCGTGCCACGTGGAATGCCACGTGGCGCCTCATGATGTCACAGCTCGCTCCCTCCGACCCYTCAGGCGGTTACGCCAGGCCGGCCTCCAAGTTCCGCTTACCACAGAAGAACATCTCAAGCCCAACGAGCCTGCACCTYTACGTGGCCCTTCCATGCCCGTGGGCCCACCGGACACTTATAGTCCGGGCCCTCAAGGGCCTTGAGGACGCCGTCCCGGTTTCYGTAGCATCCCCAGGCCAGGACGGGTCGTGGGAGTTCAAACAGGCCAATGGGCCGGGTTTAAGCCCGGGACTGGACAAGGCAAACAGGTGTAGAACGTTGAGGGAAGTTTATGGGATGAGAAAAGGTGGGTATGATGGGAGGGCCACGGTGCCTATGCTGTGGGACAAGGATTCGAAGGAGGTTTTGTGCAATGAGAGTTATGACATAATTGAATTTTTCAATTCCGGGTTGAACGGGTTGGCCCACAACTCGGGTTTGGATCTATCGCCTTCTGAGTTGAAGGGGAAGATTGAGGAATGGTATAGTGTGATATACCCAAATGTGAACAATGGTGTTTACAGGTGTGGATTTGCACAGACACAAGAAGCTTATGACAGAGCAGTGAATGAGTTGTTTGGAACATTAGACAAGYTGGAGGATCACTTGACCAGTTCCCGCTACTTATGTGGAGAAAAATTGACCCTTGTAGATATATGTCTGTTTACCACTCTAATTCGGTTTGATGTTGCATACAATGTTCTTTTTAAGTGTACCAAGAAGAAGTTATGTGAGTATCCAAATCTACATGCCTACATGCGTGACATTTATCAGATGCCTAAGGTTGCAGAAACCTGCAATTTTTCAGAAATCATGGATGGTTATTACAAAATACTTTTCCCTCTAAATCCAGGGAGCATAAGACCAATCATGCCTTCCACTTCTGAGCATGAAATCCTTTGCAGACCTCATGGTAGGGAATCTCTATCAGCAGCTTTACCTGTCTTTGTTAAATAG 1233 0.4964 MPCYAPSFCPYLVTPPSTSVHRGSRHRRPTKRNVTIHYPKMSLNNNDNTSNPNPSSLLTSLTKLLWGQSLPPGLLVSTARATWNATWRLMMSQLAPSDPSGGYARPASKFRLPQKNISSPTSLHLYVALPCPWAHRTLIVRALKGLEDAVPVSVASPGQDGSWEFKQANGPGLSPGLDKANRCRTLREVYGMRKGGYDGRATVPMLWDKDSKEVLCNESYDIIEFFNSGLNGLAHNSGLDLSPSELKGKIEEWYSVIYPNVNNGVYRCGFAQTQEAYDRAVNELFGTLDKLEDHLTSSRYLCGEKLTLVDICLFTTLIRFDVAYNVLFKCTKKKLCEYPNLHAYMRDIYQMPKVAETCNFSEIMDGYYKILFPLNPGSIRPIMPSTSEHEILCRPHGRESLSAALPVFVK* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1054 410 PANTHER GLUTATHIONYL-HYDROQUINONE REDUCTASE 42 404 IPR016639 GO:0004364
Amo02g1054 410 Pfam Glutathione S-transferase, C-terminal domain 274 346 - -
Amo02g1054 410 SFLD Glutathione Transferase (cytosolic) 93 400 IPR040079 -
Amo02g1054 410 Gene3D Glutaredoxin 88 248 - -
Amo02g1054 410 Pfam Glutathione S-transferase, N-terminal domain 131 227 IPR004045 -
Amo02g1054 410 SUPERFAMILY GST C-terminal domain-like 236 372 IPR036282 -
Amo02g1054 410 PANTHER GLUTATHIONE S-TRANSFERASE C-TERMINAL DOMAIN-CONTAINING PROTEIN-LIKE 42 404 - -
Amo02g1054 410 Gene3D - 250 407 - -
Amo02g1054 410 SUPERFAMILY Thioredoxin-like 120 228 IPR036249 -
Amo02g1054 410 CDD GST_C_Omega_like 243 384 - -
Amo02g1054 410 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 216 385 IPR010987 -
Amo02g1054 410 SFLD Xi.1 93 400 IPR016639 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1054 Amo-Chr2 16825958 16827789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1054 111 369 Glutathione S-transferase Gene Family AT5G02780 23.019 1.36e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1054 K07393 - gmx:100812499 593.193