Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1052 ATGAGTCACTCTTTAACTTTGGTGTTGTTTTTTGCAGATAATGCTGGTGTCATTGTGGATCCTAAAGGTGAAATGAAAGGTTCTACTATCACTGGTCCAATTGGCAAGGAGTGTGCTGATTTGTGGCCTAGGATTGCAAGTGCGGCCAATGCAATTGTTTGA 162 0.4198 MSHSLTLVLFFADNAGVIVDPKGEMKGSTITGPIGKECADLWPRIASAANAIV* 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1052 53 PANTHER 60S RIBOSOMAL PROTEIN L23 8 53 - -
Amo02g1052 53 SUPERFAMILY Ribosomal protein L14 8 53 IPR036853 GO:0003735|GO:0005840|GO:0006412
Amo02g1052 53 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 8 53 IPR000218 GO:0003735|GO:0005840|GO:0006412
Amo02g1052 53 Gene3D Ribosomal protein L14 2 53 IPR036853 GO:0003735|GO:0005840|GO:0006412
Amo02g1052 53 Pfam Ribosomal protein L14p/L23e 8 53 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1052 Amo-Chr2 16753226 16753574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1052 9 53 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 88.889 2.51e-25 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1052 K02894 - mis:MICPUN_90970 87.0409