Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1030 ATGTCTTGTATCTATAAATTAACCCACACCCACTTTTCTCTGTCCTCACACATAAAACAACACTGCTCTTTGTCTCATCCTTCAAATCCCTCTATCTTCTTCTTCCAAAGGGGAGTTCCACTCAAACCCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTTGAGATGGATAACAGGTTGGCCACAAACTCCTCTTATGCTTCTCTTAGATTGCCCGTTGGCTACAGATTCTGCCCCTCTGACGAGGTTTTTGTCTCTTGCTACCTCAAAAACAAGGCCCTTTCAAAAACATTGGATTTTGATGTTGTTCCTGTCTTCGATGTCTTCAACACTGAGCCCAAGAATCTCCCTTCAGGTGGAAAGGTGTTTCTGGAGACAAAGTACTTTTACTTTGATCTGAAAGAGCGTGTGTTTGAAGACAATAACAAGATTGAAGCAGGGAAAGGGCACTGGAAAAGGGTGGGGAAAGGGAATCAGGAGCTTCTAAATAACAACAACAAACTCATTGGGTTCAAGACCAAGTTTGTTTTTTGGAGGAAGAAGAACCGCACTCAATTTCTTAAAACTAAGTGGGTTATGTTTGAGTTCCGTGTTTTTCTCAACCCCTCTCAGATAATGTCGTCATGGGCTGGCTACAAAATATATCTGAAGAAGGATAAGAGGAGGAACAAGAAGGCAAAGTTTTCTTGCGAGGAAAGCAGTGATGATGAAGAAGAAGAAGCAGAAAGAGCAAGTGAAGTGAATTTTCCAGATGAGATAAGTGGAATTAACACAGGACCTCCTTCACCAACTTCATCTAATGAATCCTCTGTTACAAGTTAA 819 0.4127 MSCIYKLTHTHFSLSSHIKQHCSLSHPSNPSIFFFQRGVPLKPPFFFFFFFFFEMDNRLATNSSYASLRLPVGYRFCPSDEVFVSCYLKNKALSKTLDFDVVPVFDVFNTEPKNLPSGGKVFLETKYFYFDLKERVFEDNNKIEAGKGHWKRVGKGNQELLNNNNKLIGFKTKFVFWRKKNRTQFLKTKWVMFEFRVFLNPSQIMSSWAGYKIYLKKDKRRNKKAKFSCEESSDDEEEEAERASEVNFPDEISGINTGPPSPTSSNESSVTS* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1030 272 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 70 224 - -
Amo02g1030 272 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 70 224 - -
Amo02g1030 272 ProSiteProfiles NAC domain profile. 70 216 IPR003441 GO:0003677|GO:0006355
Amo02g1030 272 Gene3D NAC domain 79 222 IPR036093 GO:0003677|GO:0006355
Amo02g1030 272 SUPERFAMILY NAC domain 61 216 IPR036093 GO:0003677|GO:0006355
Amo02g1030 272 Pfam No apical meristem (NAM) protein 71 197 IPR003441 GO:0003677|GO:0006355
Amo02g1030 272 MobiDBLite consensus disorder prediction 221 272 - -
Amo02g1030 272 MobiDBLite consensus disorder prediction 250 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1030 Amo-Chr2 15778975 15780688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1030 55 217 NAC Transcription Factor Family AT5G13180 33.728 1.36e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo02g1030 NAM 1.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1030 - - aip:107604830 461.455