Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1013 ATGGAAACTGCACCCGCTTGCTTCTTCTGCGGTGGAATCCCTGCAACTGCAACTGCCACAGCGACATCAACTCCGAATTCTGTGCCTTTCCGTTGTACCGTTAGAGTTCCATTCTCTTCTTCGTTTGCCTCGCTCTGCCTGTTAGCTCGTACCAGGCACGGCGGCGGCGGCGGTGGCGCTTCTGTTTTTCGCTCTTTGTTCTCGTCGTCGTCTTCGTCGGTCACCGGCCTCGGCCTAATTCGAAGCGCCGCTAACAGCGAAACGAAGCTCCCGGCTCCAAGTAACGCTAAACGAAGTAGAAGAAGAACGCGAACGCGAACTGTTTCTCCTCCTACTCCTCGGCCTCCGTCTCCGGAGAAAACTAACAGTAACGGTAACGGTAACAGCAATGAGAATGGGGATCCTCTCGGGTGGAAGGATCTTGGGAAGAGTGTTGTGAGATGGATTAGGGAGGGCATGAGGGCCATGGCGTTGGATTTCGCGGCGGCGGAGTTGCAGGGGGAAGTGGAATTCGGTGAGCTGAGTCAGCGAATGGGGCCTGGTCTGACTTTTGTGATCGAGGCTCAGCCTTATCTGAACGCTGTTCCGATGCCACTTGGGCTTGAAGTGATGTGCTTCAAGGCCTGCACACACTACCCAACTCTCTTTGATCACTTCCAGAGGGAGCTTCGGGAGGTTCTCCAGGACCTTCAGAATAAGTCCTTGCTCCAAGACTGGCGCCAAACGCAGTCTTGGAAGCTGCTTAAAACTCTCGCCAATTCAGCTCAGCATCGAGCAGTGGCCAGAAAGATAGTCCATCCCCTGCCCAAGACTGTCCAAGGTGTTTTAGGAATGGACTTGGACAAGGTCAAAGCAATGCAGCAGAGGATTGAGGATTTCACCAACCGCATGTCTGAACTACTCCGTATTGAAAGGGATGCTGAATTGGAGTTCACTCAGGAGGAATTGGATGCTGTTCCTAGGCCTCTGGATGATGCTTCCGACCCCTCAAGACCGATTGAGTTCTTGGTTAGCCATAGCCAGCCTCAGCAAGAACTCTGTGACACCATTTGCAACTTAACTGCCATCAGTACCTCTACCGGACTTGGGGGAATGCATTTGGTGTTGTTCAAGGTTGAAGGTAACCATCGATTACCACCTACTACTCTTTCACCTGGAGATATGGTTTGTGTCAGAACATGTGACAGCAGGGGTGCAGTTACAACATCTTGCATACAAGGATTTGTGAACAATCTTGGGGATGATGGCTGCAGTATTATTATTGCTCTAGAGTCACGCCATGGTGATCCTACATTTTCCAAACTATTCGGAAAGAGTGTGCGCATAGACCGTATTCAAGGACTGGCTGATACACTTACCTATGAGCGCAACTGTGAAGCTCTAATGCTGCTTCAGAAGAATGGCTTGCGGAAGAAGAATCCTTCAATTGCTGTTGTAGCTACACTCTTTGGAGAAGAGGAAGATGTCACATGGCTTGAGAAGAACAATTTTGTTGACTGGGAAGAAGAAAAATTAAATGGACTGCTAGAAAATGAAACATTCGATAGTTCTCAGCAGCGAGCAATTGCATTGGGTTTGAATAAGAAGAGACCTGTATTGGTTATCCAAGGGCCTCCGGGTACAGGCAAGACTGGTTTGCTCAAGCAACTTATAGTATGTGCCGTTCAACAAGGTGAAAGGGTTCTAGTGACGGCACCTACGAATGCAGCTGTTGATAACATGGTTGAAAAGCTTTCAAATGTTGGATTAAATATTGTCCGAGTTGGAAATCCTGCTCGTATTTCAAAAGCTGTGGGATCAAAGTCTTTGGGTGCAATTGTAAATTCAAAGCTTGCAAGTTTTCGAGAAGAGTATGAAAGGAAAAAGTCAAATCTAAGGAAGGATCTAAGACTTTGTTTAAAGGACGATTCACTAGCTGCAGGCATACGGCAACTTCTGAAACAGCTGGGAAGGTCTCTCAAGAAAAAAGAAAAACAGACTATGAATGAAGTTTTATCTAGTGCGCAGGTTGTGCTTGCCACTAATACTGGAGCAGCTGATCCCTTGATTCGAAGGCTAGATGCTTTTGACTTGGTTGTCATAGATGAAGCGGGACAAGCAATTGAACCATCTTGTTGGATTCCTATATTGCAGGGAAAGCGCTGTATTCTTGCTGGCGATCAATGCCAACTTGCTCCTGTCATATTGTCCAGACAGGCCTTAGAAGGTGGCCTAGGAATATCACTACTGGAGAGAGCTACAGCTTTGCACGAAGGGATTCTAACCACCAGGCTAACAACACAATACCGTATGAATGATGCAATTGCTAGTTGGGCCTCAAAGGAGATGTACGGAGGATTGTTGAAGTCTTCTGAGTCTGTCTTTTCTCATCTTCTTGTAGACTCTCCTTTTGTTAAGCCTACTTGGATAACCCAATGTCCACTGCTATTGCTTGATACAAGAATGCCATATGGAAGTCTGTCGGTTGGTTGCGGAGAGCATCTGGACCCAGCAGGAACGGGCTCATTTTATAATGAAGGAGAAGCTGATATAGTTCTGCAGCACGTCGTTTCCTTGGTTTATGCTGGTGTTAACCCAGCTGCCATTGTGGTGCAGTCCCCTTATGTCGCTCAAGTGCAGCTTCTGAGGGACATGCTTGATGAGGTACCTGAAGCTGCTGGTACTGAGGTTGCAACCATTGATAGTTTTCAAGGTCGCGAAGCTGATGCAGTAATTTTATCCATGGTACGGTCAAACACATTGGGAGCTGTTGGATTCCTTGGTGATAGCAGAAGAATCAATGTTGCCATCACAAGGGCACGCAAACATGTAGCCGTGGTCTGTGACAGCTCAACAATATGCCACAACACCTTCCTGGCAAGACTTCTGCGTCACATTCGACACTTTGGTCGGGTGAAGCATGCAGAACCAGGTAGTTTTGGGGGTTCTGGACTAGGGATGAACCCCACATTACCCTCCATTAATTAG 2967 0.4766 METAPACFFCGGIPATATATATSTPNSVPFRCTVRVPFSSSFASLCLLARTRHGGGGGGASVFRSLFSSSSSSVTGLGLIRSAANSETKLPAPSNAKRSRRRTRTRTVSPPTPRPPSPEKTNSNGNGNSNENGDPLGWKDLGKSVVRWIREGMRAMALDFAAAELQGEVEFGELSQRMGPGLTFVIEAQPYLNAVPMPLGLEVMCFKACTHYPTLFDHFQRELREVLQDLQNKSLLQDWRQTQSWKLLKTLANSAQHRAVARKIVHPLPKTVQGVLGMDLDKVKAMQQRIEDFTNRMSELLRIERDAELEFTQEELDAVPRPLDDASDPSRPIEFLVSHSQPQQELCDTICNLTAISTSTGLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRTCDSRGAVTTSCIQGFVNNLGDDGCSIIIALESRHGDPTFSKLFGKSVRIDRIQGLADTLTYERNCEALMLLQKNGLRKKNPSIAVVATLFGEEEDVTWLEKNNFVDWEEEKLNGLLENETFDSSQQRAIALGLNKKRPVLVIQGPPGTGKTGLLKQLIVCAVQQGERVLVTAPTNAAVDNMVEKLSNVGLNIVRVGNPARISKAVGSKSLGAIVNSKLASFREEYERKKSNLRKDLRLCLKDDSLAAGIRQLLKQLGRSLKKKEKQTMNEVLSSAQVVLATNTGAADPLIRRLDAFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRQALEGGLGISLLERATALHEGILTTRLTTQYRMNDAIASWASKEMYGGLLKSSESVFSHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSVGCGEHLDPAGTGSFYNEGEADIVLQHVVSLVYAGVNPAAIVVQSPYVAQVQLLRDMLDEVPEAAGTEVATIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITRARKHVAVVCDSSTICHNTFLARLLRHIRHFGRVKHAEPGSFGGSGLGMNPTLPSIN* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1013 988 Gene3D - 297 746 IPR027417 -
Amo02g1013 988 SMART AAA_5 529 744 IPR003593 -
Amo02g1013 988 CDD SF1_C_Upf1 764 960 IPR041679 -
Amo02g1013 988 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 115 988 - -
Amo02g1013 988 Pfam AAA domain 740 943 IPR041679 -
Amo02g1013 988 MobiDBLite consensus disorder prediction 119 133 - -
Amo02g1013 988 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 115 988 - -
Amo02g1013 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 512 951 IPR027417 -
Amo02g1013 988 MobiDBLite consensus disorder prediction 85 137 - -
Amo02g1013 988 CDD DEXXQc_SMUBP2 514 763 - -
Amo02g1013 988 Gene3D - 762 970 IPR027417 -
Amo02g1013 988 Coils Coil 615 635 - -
Amo02g1013 988 Pfam AAA domain 514 730 IPR041677 GO:0004386
Amo02g1013 988 Coils Coil 283 310 - -
Amo02g1013 988 SMART ultradead3 510 762 IPR014001 -
Amo02g1013 988 Gene3D - 335 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1013 Amo-Chr2 15599196 15605574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1013 500 703 Core DNA Replication Machinery Family AT1G08840 26.699 1.55e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1013 - - aip:107625008 1839.7