Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0991 ATGCTTCTCCAAGGAGGAACGGGGATTCCCCATCTCAAGTGGTTTGGTGTTGAGGGAGACTACAATGTCATGGTTATTGACCTCCTCGGTCCAAGTCTAGAAGATTTGTTTAATTATTGCAACCGTAAGTTCTCATTGAAGACAGTGTTAATGCTTGCTGATCAATTGATTAACAGAGTCGAATATATGCATTCAAGAGGTTTTCTTCACCGGGACATAAAGCCAGACAATTTTTTAATGGGCTTAGGCCGCAAAGCAAATCAGGTATACATTATTGACTATGGCCTTGCGAAAAAGTATAGGGATCTTCAAACTCATAGACACATACCATACAGGGAAAACAAGAATCTTACTGGTACAGCACGCTATGCAAGTGTCAACACACATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGCTATGTGCTCATGTACTTCTTAAGGGGAAGTCTTCCCTGGCAGGGACTTAAGGCTGGCAACAAAAAACAAAAATATGATAGAATCAGTGAGAAGAAAGTATCAACTCCCATAGAGGTGCTCTGCAAATCATATCCTGCTGAGTTTGTATCATACTTCCATTACTGCCGTTCTTTGCGGTTTGAAGACAAGCCAGATTATTCATATCTAAAGAGACTTTTCCGCCATCAATTCGACTATGTTTTTGACTGGACTGTACTGAAGTATCCACATGTTGGCGACAGCAGCTCTAGAGGGCGGAATGGTGCCGGCAAGGCAGCTATGAATGCTGGGCCAACTGCATACAAACCTGAAAAGATCTCAGTTGGAAGAGATAGCCGAGAGCAATACGATGTATACGACCGGAGGAACCAAATGACTAGCCCTCCTGTTGATCACATRAGATACAGAAGTTCTGACGATGTAGCAATACACAGGGATATGCACCATGATGAATATGACGAATACAATACAACTCGTTATGCGAGCACTTCAAGAAGGGCTATAGTCACATCAAATAAGCATGTTTCCTCAGGCGACTATGGTTATGCTGGGATGACWCCGAGTAGGGGCTACGGTGGGATGACCCCAAGTAGAGGCTACGGTAACCCTGGCATGACCCCAAGTAGGGGTCATCCCACCGGTCATGCCGGTAACCCTGGCATGACCCCAAGCAGGGCCTTTCCTGTTCATCCAGGCATGACCCCGAGCAGGGGCCATCCAACCACCACACATCGGATTCAACCTATTTATGAGACCAAACCAGCAACTTTTACTCGCAATGGATCTACAAGACGCCAGCGTGATGAAACTCTAAGGAACTTCGAGCACCTTAATATCAGGAAAGCGGCCAAACGTTCCTCAAGTTCATCAATGCCAGAGCTGAAAATGCATCAAATTTCCAAGGTGCCATTTGCTGTAAACAAGATTCTCGAATTTAGCACAGGTGAAGACGGTTAA 1428 0.4489 MLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYDRISEKKVSTPIEVLCKSYPAEFVSYFHYCRSLRFEDKPDYSYLKRLFRHQFDYVFDWTVLKYPHVGDSSSRGRNGAGKAAMNAGPTAYKPEKISVGRDSREQYDVYDRRNQMTSPPVDHXRYRSSDDVAIHRDMHHDEYDEYNTTRYASTSRRAIVTSNKHVSSGDYGYAGMTPSRGYGGMTPSRGYGNPGMTPSRGHPTGHAGNPGMTPSRAFPVHPGMTPSRGHPTTTHRIQPIYETKPATFTRNGSTRRQRDETLRNFEHLNIRKAAKRSSSSSMPELKMHQISKVPFAVNKILEFSTGEDG* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0991 475 SMART serkin_6 1 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0991 475 MobiDBLite consensus disorder prediction 239 260 - -
Amo02g0991 475 SUPERFAMILY Protein kinase-like (PK-like) 3 227 IPR011009 -
Amo02g0991 475 PANTHER CASEIN KINASE-RELATED 1 336 - -
Amo02g0991 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 68 80 IPR008271 GO:0004672|GO:0006468
Amo02g0991 475 Pfam Protein kinase domain 20 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0991 475 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 336 - -
Amo02g0991 475 Gene3D Transferase(Phosphotransferase) domain 1 3 272 - -
Amo02g0991 475 MobiDBLite consensus disorder prediction 350 400 - -
Amo02g0991 475 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0991 Amo-Chr2 15138288 15146959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0991 35 211 MAP Kinase Kinase Kinase AT1G62400 29.282 6.31e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Amo02g0991 Pkinase 1.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0991 K08960 - cam:101493293 581.637