Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0966 ATGAAAGCATTTTTATGTTTGGTTGATTTTTTGTATTCTTTGTTTCCAGGTATTTACATAATTAACATTGGCAAGACATGGGCGAAGCTCCAACTTGCTGCTAGGATTGTTATTGCTATCAAGAACCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGAGATGTCGTTAAGTTTGCACAATACATTATTGCGAATGCAATCGCTAGAAGGCACACTCCTGGAACATTCACTAATCAAATGCAAACATCCTATAACGAGCCTCGTCTACTCATTCTGACTGATCCAAAGACTGATCATCAGGTGCCACTTATGTTATTCACTTGTTTTACTATTAGCTGTCAATATGTTTTTTGTGGGAGTTTGAAATTCTGTTATTAA 390 0.3769 MKAFLCLVDFLYSLFPGIYIINIGKTWAKLQLAARIVIAIKNPQDIIVQSARPYGQRDVVKFAQYIIANAIARRHTPGTFTNQMQTSYNEPRLLILTDPKTDHQVPLMLFTCFTISCQYVFCGSLKFCY* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0966 129 PRINTS Ribosomal protein S2 signature 91 108 IPR001865 GO:0003735|GO:0005840|GO:0006412
Amo02g0966 129 PRINTS Ribosomal protein S2 signature 66 83 IPR001865 GO:0003735|GO:0005840|GO:0006412
Amo02g0966 129 PRINTS Ribosomal protein S2 signature 17 26 IPR001865 GO:0003735|GO:0005840|GO:0006412
Amo02g0966 129 CDD RPS2 10 105 IPR001865 GO:0003735|GO:0005840|GO:0006412
Amo02g0966 129 Gene3D - 9 107 - -
Amo02g0966 129 SUPERFAMILY Ribosomal protein S2 10 105 IPR023591 -
Amo02g0966 129 PANTHER 40S RIBOSOMAL PROTEIN SA 17 104 IPR005707 GO:0003735|GO:0006412|GO:0015935
Amo02g0966 129 PANTHER 40S RIBOSOMAL PROTEIN SA 17 104 - -
Amo02g0966 129 Pfam Ribosomal protein S2 10 89 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0966 Amo-Chr2 14953435 14953824 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0966 17 104 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 81.818 4.02e-50 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0966 K02998 - sind:105168675 156.762