Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0959 AGGGGACAAGCTGAGAGAGAATTTAGGGTAGAAGTAGAAGCTATTGGTCGTGTGCGGCACAAGAATCTTGTTAGATTGCTTGGATACTGTGTYGAGGGCGCGTACAGGATGCTTATGTATGAATATGTTGACAATGGGAATCTGGACCAGTGGCTGCATGGGGATGTTGATTCTGTAAGCCCTCTGACTTGGGATATCCGGATGAACATCATCTTGGGAATGGCGAAAGGATTGGCTTATCTTCATGAGGGGCTYGAACCAAAAGTTGTCCACCGAGACGTGAAATCAAGCAATATACTCCTTGATCGCCAATGGAACCCAAAGGTTTCTGACTTTGGGCTYGCTAAGCTTCTCTGTTCTGATCATAGCTATGTCACAACCCGAGTGATGGGGACATTTGGTTATGTTGCACCGGAGTATGCATGCACTAGAATGCTGACTGAGAAGAGTGATGTTTATAGCTTTGGGATACTTATTATGGAAATAATTACCGGAAGAAGTCCCGCTGATTATAGTAAACCCCAAGGAGAGGTTAATTTAATTGAGTGGTTGAAAACTATGGTTGGCAATAGAAAATCAGAGGAACTCATTGATCCGAACCTTCCTGAAAAGCCGTCTTCAAAGGCTCTTAAGCTTGCTCTGTTGGTTGCTCTTAAATGTGTTGATCCTGATGCCACAAAGAGACCTAAAATCGGACACATAATCCACATGCTTGAGGCCGACGAGATCCTATTCCGTGATGAGCAGAGGATCGGAGGAGAATCGTCGCGATCCCATCGCAATTATCATCATCATGAGCAAAAGGACTCTAGCAGAGAGAGAAAGCGAATAGGTGGAGAGATCATTGATCAAAGTGAAGATGATAATAGTAGTAAAATCTTGCCCATCCCACTAGATTGA 900 0.44 RGQAEREFRVEVEAIGRVRHKNLVRLLGYCVEGAYRMLMYEYVDNGNLDQWLHGDVDSVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLCSDHSYVTTRVMGTFGYVAPEYACTRMLTEKSDVYSFGILIMEIITGRSPADYSKPQGEVNLIEWLKTMVGNRKSEELIDPNLPEKPSSKALKLALLVALKCVDPDATKRPKIGHIIHMLEADEILFRDEQRIGGESSRSHRNYHHHEQKDSSRERKRIGGEIIDQSEDDNSSKILPIPLD* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0959 299 PIRSF TyrPK_CSF1-R 15 69 - -
Amo02g0959 299 PIRSF TyrPK_CSF1-R 57 295 - -
Amo02g0959 299 Gene3D Transferase(Phosphotransferase) domain 1 44 251 - -
Amo02g0959 299 SMART serkin_6 1 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0959 299 MobiDBLite consensus disorder prediction 253 287 - -
Amo02g0959 299 SUPERFAMILY Protein kinase-like (PK-like) 4 239 IPR011009 -
Amo02g0959 299 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 280 - -
Amo02g0959 299 ProSiteProfiles Protein kinase domain profile. 1 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0959 299 Gene3D Phosphorylase Kinase; domain 1 1 43 - -
Amo02g0959 299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 89 101 IPR008271 GO:0004672|GO:0006468
Amo02g0959 299 Pfam Protein kinase domain 5 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0959 299 PANTHER OS01G0323000 PROTEIN 1 280 - -
Amo02g0959 299 MobiDBLite consensus disorder prediction 253 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0959 Amo-Chr2 14815188 14816604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0959 3 239 Receptor kinase-like Gene Family AT4G02010 46.058 1.14e-70 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Amo02g0959 Pkinase 3.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0959 - - aip:107626519 497.278