Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0957 TGCCTCGGAGGTGCACCCGCCGCCGCCCCTGCGTCCAACCCGCAGCCACCGGCCTTCGCGAGCTTGCATGGAGGCATCGCCGCTGCCGTCCAGCTCCCAACCCTCCGCTGTTCGCTGTTCGAGTTCTCCCTACCTCTTCCCGAAGCCGCCACTCGCCCCTGCAAGTCCTCGCCGCTTCGTTCTCCGTTTCGATTCCAAGGAAAGACCGCCACCAGGAGTGGTGGAGCACCATGGGCTTCTCCCTTCCACGCCGCGAAAGCGCCGACGTCGGCGCTGCTCCTCGCATCGTCATCAGGGTTCGGCGCCTCCCAAGGAAGAAACCGCCAAGCGTCCTCCCCTCCCGCATCTCGTTCTGCCTACAAATCTCCTGGGTGCGTCATCGACGAATCAAACCACGGTCGATCCCCTGCAGTCCACACAATACCTCTACCACCAGATCTGCTGTGGATGGAAACCCTGGAATTGAGTTTTCAAATGCGTGATCTGCTGGTTGACATTCTACTTGAACTGCAAGTTCTGTTGATTCTTCAGCTGAGGTTGATTTGGCTTGAATCTGAAAAATTGGAGGCTGCTGGAGTTGTTGATGATCGTGCAAGGTTGCACAAATTTTGTTGCAAGTTGCTTAAATTTCTTCTAGTAGCTTCGTCCGTTTTTGATAATCTGAATCCAAGCGTTATATCTGGCAAGAAAGACCCTCCGATCAGCTCTTCCAAGAATAAGTTAAAAACACTCAGCTGGCAAGAACGGCGGAAACTTGAAAGAGATAGAAAGCAGAAAGAAGAGGATGAGCAAACATTAGCAAAAGTGGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTGCTCAAACAAATGGGTTATACGTCCGGTGCTGCCCTTGGCAAAGAGGGTTTAGGTAGGGCTGAGCCAGTGGGGATTGAGATTCGACGATCGCGAGCTGGTATTGGCTTAGATGATCCTCACAAGGAGAAGAGGAAAAAGGAGGAAATCATAGCTGAGAGAAAAAGGAGGAAAGAGGAGGATCTAATGCAAGACTTTGGGTTGAGACAGAAGGATGACCACAATTATTGCCTCTTTTGTGGATGCAAGTATGAATCAAAGGATGATCTCTTGACCAACTGCCCTGGAACCAATGAAGATGATCACTAA 1152 0.5113 CLGGAPAAAPASNPQPPAFASLHGGIAAAVQLPTLRCSLFEFSLPLPEAATRPCKSSPLRSPFRFQGKTATRSGGAPWASPFHAAKAPTSALLLASSSGFGASQGRNRQASSPPASRSAYKSPGCVIDESNHGRSPAVHTIPLPPDLLWMETLELSFQMRDLLVDILLELQVLLILQLRLIWLESEKLEAAGVVDDRARLHKFCCKLLKFLLVASSVFDNLNPSVISGKKDPPISSSKNKLKTLSWQERRKLERDRKQKEEDEQTLAKVEAPIPQSNIGFKLLKQMGYTSGAALGKEGLGRAEPVGIEIRRSRAGIGLDDPHKEKRKKEEIIAERKRRKEEDLMQDFGLRQKDDHNYCLFCGCKYESKDDLLTNCPGTNEDDH* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0957 383 PANTHER UNCHARACTERIZED 352 383 IPR039249 -
Amo02g0957 383 PANTHER UNCHARACTERIZED 223 355 IPR039249 -
Amo02g0957 383 SMART G-patch_5 273 319 IPR000467 GO:0003676
Amo02g0957 383 ProSiteProfiles G-patch domain profile. 275 321 IPR000467 GO:0003676
Amo02g0957 383 SMART DUF4187_2 338 383 IPR025239 -
Amo02g0957 383 Pfam G-patch domain 275 318 IPR000467 GO:0003676
Amo02g0957 383 Pfam Domain of unknown function (DUF4187) 353 383 IPR025239 -
Amo02g0957 383 MobiDBLite consensus disorder prediction 102 118 - -
Amo02g0957 383 Coils Coil 249 269 - -
Amo02g0957 383 MobiDBLite consensus disorder prediction 102 121 - -
Amo02g0957 383 MobiDBLite consensus disorder prediction 51 79 - -
Amo02g0957 383 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 11 352 383 - -
Amo02g0957 383 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 11 223 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0957 Amo-Chr2 14784846 14794724 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0957 267 367 C2H2 Transcription Factor Family AT5G26610 30.328 8.76e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0957 - - adu:107473787 241.506