Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0950 ATGTCAGTCTACGACGCAGCATTCGTAGAAACACAGCTCTCAAAGCGCACTTCCATCTTCGGCCTCCGTCTATGGGTCCTCATCGGAATCCTCGTCGGCGCTCTCATCGTCTTCTCCCTCTTCCTCCTCTCTCTCTGCTTCACCTCCCGCCGTAACCGCCGCCACCGCCGCAACCACAAGCCTCTCACTCCTCTCGTCTCCAAGGAAATCCAGGAAATCATTTCCACTCCTCCCAATCCTCAACCGCATGAACTCCACCTCGACATCGGAAAAGCTGCGGCGGCGGAGCAGCACCGCAGGGTGGTGTCTGCTGTGGCGTTCTCAAGCGGAGAAAGCAAAGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAAGCGTGTGCGAAACGACGTCGTCGTTTGGGAGTGGAAGCGTATCGGCGGGACCAGAGGTTTCGCATCTTGGTTGGGGGAAGTGGTTTACGCTGAGGGAAATGGAGGATGCGACTGGAGGAATGTGTGAGGAGAATGTGATCGGTGAAGGTGGCTATGGAATCGTGTACCGTGGTGTTCTCTCTGATGGTACCAATGTTGCTGTTAAGAATCTCTTGAATAACAAGGGACAAGCTGAGAGAGAATTTAGGGTAGAAGTAGAAGCTATTGGTCGTGTGCGGCACAAGAATCTTGTTAGATTGCTTGGATACTGTGTCGAGGGCGCGTACAGGATGCTTGTGTATGAATATGTTGACAATGGGAATCTGGACCAGTGGCTGCATGGGGATGTTGATTCTGCAAGCCCTCTGACTTGGGATATCCGGATGAACATCATCTTGGGAACGGCGAAGGGATTGGCTTATCTTCATGAGGGGCTCGAACCAAAAGTTGTCCACCGAGACGTGAAATCAAGCAATATACTCCTTGATCGCCAATAG 918 0.5359 MSVYDAAFVETQLSKRTSIFGLRLWVLIGILVGALIVFSLFLLSLCFTSRRNRRHRRNHKPLTPLVSKEIQEIISTPPNPQPHELHLDIGKAAAAEQHRRVVSAVAFSSGESKGGGGGGGGGGGGGGSVCETTSSFGSGSVSAGPEVSHLGWGKWFTLREMEDATGGMCEENVIGEGGYGIVYRGVLSDGTNVAVKNLLNNKGQAEREFRVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLDQWLHGDVDSASPLTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQ* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0950 305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
Amo02g0950 305 SMART serkin_6 168 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0950 305 ProSitePatterns Protein kinases ATP-binding region signature. 174 196 IPR017441 GO:0005524
Amo02g0950 305 MobiDBLite consensus disorder prediction 108 128 - -
Amo02g0950 305 ProSiteProfiles Protein kinase domain profile. 168 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0950 305 PANTHER OS01G0323000 PROTEIN 1 305 - -
Amo02g0950 305 Gene3D Transferase(Phosphotransferase) domain 1 244 305 - -
Amo02g0950 305 Gene3D Phosphorylase Kinase; domain 1 142 243 - -
Amo02g0950 305 Pfam Protein kinase domain 171 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0950 305 SUPERFAMILY Protein kinase-like (PK-like) 144 304 IPR011009 -
Amo02g0950 305 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0950 Amo-Chr2 14746410 14748959 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0950 102 305 Trihelix Transcription Factor Family AT1G23540 42.202 2.93e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Amo02g0950 Pkinase 5.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0950 - - pvy:116134269 421.009