Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0948 ATGACTGCTGCACTTGATGGAGCTTTACTTTCTGGCTTCATTAACGTTCTCTTTGAAAGGTTCCTTACAGTAGATGCTGTAAACTTGGTCTTGGGCAAGAAGCTTGGCCCGGACTTAGTTAAAAGGCTGAAGATTGCTCTGTTGGGTGCTGAAGCTCTTGTTGCCGATGCTGAGTTGAAGCAGTTTGGTAATCCATCTGTGAGGAAGTGGCTTGATAGTCTCAGGGATGTTGTTTACTGTGCTGAGGACATGCTGGACGCTGACGTCACTAAAGCCACCACTCAAAAGCAGGTAGATTCTTTCCTCAACCCGATTAACTTCATCATCAACCGAGATAGGGAGTTGGTAGATAAGATGCAAATGGTGGTTAGAACAATAGAGGATCTTGTAAACCAAAAAGATCCCCTTGGTCTTGAAAAGATTCCTGCTGGTAGCTCATCATGGAGGACTCCATCCACTTCTCTTGTGAGAGGGAATGTGTATGGAAGGGAGGATGACAAGAAGGCCTTAATCAAGATGCTGAATGACAACAACGAGCATCACCTGTCTGTGATCGCTATTGTTGGCATAGGTGGGGTTGGTAAAACAACTTTGGCCCAATGGCTATACAACAATGAGGAGGAGTTCATGAAGGGATTTGATCTGAAAGCATGGGTTTGTGTTTCAGAAAATTTTGATATCATTGAGACTACAAGGAATGTCATAAAGCAGATCCATGGTGGTACTTGTAGTCTCGATGATTTCAATTCACTTCAAAATGCTTTGAAGGAAGAATTGTCCAATAAGAAGTTCTTTCTTATTCTCGATGATGTTTGGAGTTATGATGGTGACAAATGGAGTAATTTTATGACCCCTTTCCAATATGGGAAGAAAGAAAGTATTGTTCTCCTAACTACTCGTGGGAAAAACGTTGCTTTAGCAGTTCAAAACTGTCGCCCTTATTTTCTCAAAGGGTTGTCAGAAGACTATTGTTGGTCAGTGTTTGCTGACAATGCATCTTTTCCAGAATCAAATGGGAGAGCAGCACTTGAGGAAATAGGAAGAAAGATTGTCAAGAAGTGTGATGGCTTGCCATTAGCTGCAGAAACACTTGGTCGCTTGTTACGTACAAAGCATGATGTCGAGGAATGGAACAAGATACTAATGAGTCATATTTGGGGATTTCTGTGGAGAAGAGTAAGATTATCCCAGCATTACTGA 1200 0.42 MTAALDGALLSGFINVLFERFLTVDAVNLVLGKKLGPDLVKRLKIALLGAEALVADAELKQFGNPSVRKWLDSLRDVVYCAEDMLDADVTKATTQKQVDSFLNPINFIINRDRELVDKMQMVVRTIEDLVNQKDPLGLEKIPAGSSSWRTPSTSLVRGNVYGREDDKKALIKMLNDNNEHHLSVIAIVGIGGVGKTTLAQWLYNNEEEFMKGFDLKAWVCVSENFDIIETTRNVIKQIHGGTCSLDDFNSLQNALKEELSNKKFFLILDDVWSYDGDKWSNFMTPFQYGKKESIVLLTTRGKNVALAVQNCRPYFLKGLSEDYCWSVFADNASFPESNGRAALEEIGRKIVKKCDGLPLAAETLGRLLRTKHDVEEWNKILMSHIWGFLWRRVRLSQHY* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0948 399 Pfam Rx N-terminal domain 38 97 IPR041118 -
Amo02g0948 399 PANTHER OS05G0414200 PROTEIN 39 379 - -
Amo02g0948 399 Gene3D - 151 312 IPR027417 -
Amo02g0948 399 PRINTS Disease resistance protein signature 184 199 - -
Amo02g0948 399 PRINTS Disease resistance protein signature 258 272 - -
Amo02g0948 399 PRINTS Disease resistance protein signature 354 368 - -
Amo02g0948 399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 387 IPR027417 -
Amo02g0948 399 Pfam NB-ARC domain 163 381 IPR002182 GO:0043531
Amo02g0948 399 Gene3D - 20 127 - -
Amo02g0948 399 PANTHER DISEASE RESISTANCE PROTEIN RP 39 379 IPR044974 GO:0006952
Amo02g0948 399 Gene3D - 318 384 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0948 Amo-Chr2 14740308 14741715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0948 182 371 WRKY Transcription Factor Family AT5G45050 25.000 6.14e-10 59.3