Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0947 ATGGATTCGGCGAGGAGTTGGTTTCAGAAGTTTCAGCCTCGTGATAAAACAAAAGGGTTTGGAAAGAAGAAGGAGGATGATAACAACGGAGGAGGAGCAGACGATTCGAGTGTAGTGGTTGATGAAGCTTCTCTTTCCAATGACACAAAGCAGAAGGTTGCAGCAGCAAAGCAGTATATTGAAAACCATTACAAGGAGCAAATGAAGAATCTTCAGGAGAGGAAGGAGCGTCGGACCTTTTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAAGATCAAAACAACCTACTTAAATTTTTGGAGAAAAAGGAAACTGAATATATGCGCCTTCAGAGGCATAAGATGGGAGTTGATGATTTTGAATTGCTGACTATGATTGGCAAAGGTGCATTTGGTGAGGTCAGAGTCTGTAGGGAAAAGACTACGGGTCAGGTTTATGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTTGAACATGTCAGAGCTGAAAGGAATCTACTTGCTGAGGTTGACAGCAATTGCATAGTCAAACTATATTGTTCTTTTCAGGATGACGAGCATCTATATCTTATTATGGAGTACCTTCCAGGTGGGGATATGATGACACTGCTTATGAGAAAGGATACCTTGACAGAAGATGAAGCCAGATTTTATGTAGCAGAAACAATTCTGGCTATTGAATCTATACATAAACACAATTATATACATAGGGATATCAAGCCTGACAACTTAATACTGGATAGATATGGACACTTGAGACTGTCTGATTTTGGACTTTGTAAACCATTAGATTGTAGTACAATTGCAGAAGGGGATTTTTCTGTGGTTCCGAATGTGAATGGATCTAATGAACGTGTTATTTCAAAACGCACCCAGCGAGAACAATTACAACACTGGCAACAGAACAGGAGGACACTTGCTTATTCCACTGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTATGAGATGCTGATAGTAAACTGGAGATCTCACTTGAAATTTCCCGAAGAAGCAAGGCTGTCCCGAGAGGCTAAAGATCTAATTTGTAAACTCCTGTGCAATGTAAACCACAGATTGGGGTCCAAAGGTGCAGATGAAATAAAGGCTCACCCATTCTTCAATGGTGTTGAATGGGATAAGCTGTATCAAATGGAAGCTGCATTTATTCCAGAAGTAAATAATGAGCTAGATACTCAGAACTTTGAGAAGTTTGAAGAGTCAGACATCCAAGCTCAATCATCATCAAGACATGGTCCGTGGAGGAAGATGCTTTCATCTAAGGACTTGAATTTTGTTGGATACACATACAAGAACTTTGAAATTGTCAACGACTATCAAGTTCCTGGGATGGAGTCCGATTCAGAGATATCAGAATTATCTGAAGTTCCTGAAACATCTTCAACCAGACAATCTTCTCAAGGAAGCTTTATGAAGCTCTTGCCACCCCAATTAGAGGTATCTAACAGTGAGAAGAGGATTTCTCCTAAGTCATAA 1575 0.4032 MDSARSWFQKFQPRDKTKGFGKKKEDDNNGGGADDSSVVVDEASLSNDTKQKVAAAKQYIENHYKEQMKNLQERKERRTFLEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGQVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEHLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETILAIESIHKHNYIHRDIKPDNLILDRYGHLRLSDFGLCKPLDCSTIAEGDFSVVPNVNGSNERVISKRTQREQLQHWQQNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLIVNWRSHLKFPEEARLSREAKDLICKLLCNVNHRLGSKGADEIKAHPFFNGVEWDKLYQMEAAFIPEVNNELDTQNFEKFEESDIQAQSSSRHGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMESDSEISELSEVPETSSTRQSSQGSFMKLLPPQLEVSNSEKRISPKS* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0947 524 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Amo02g0947 524 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 477 - -
Amo02g0947 524 MobiDBLite consensus disorder prediction 9 31 - -
Amo02g0947 524 Pfam Protein kinase domain 123 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0947 524 SMART serkin_6 122 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0947 524 MobiDBLite consensus disorder prediction 479 524 - -
Amo02g0947 524 ProSiteProfiles AGC-kinase C-terminal domain profile. 401 473 IPR000961 GO:0004674|GO:0005524|GO:0006468
Amo02g0947 524 SUPERFAMILY Protein kinase-like (PK-like) 95 453 IPR011009 -
Amo02g0947 524 Gene3D Transferase(Phosphotransferase) domain 1 208 417 - -
Amo02g0947 524 Coils Coil 64 84 - -
Amo02g0947 524 MobiDBLite consensus disorder prediction 1 51 - -
Amo02g0947 524 CDD STKc_NDR_like 120 464 - -
Amo02g0947 524 ProSiteProfiles Protein kinase domain profile. 122 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0947 524 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 477 - -
Amo02g0947 524 MobiDBLite consensus disorder prediction 486 505 - -
Amo02g0947 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Amo02g0947 524 Gene3D Phosphorylase Kinase; domain 1 112 207 - -
Amo02g0947 524 SMART pkinase_C_6 401 465 IPR000961 GO:0004674|GO:0005524|GO:0006468
Amo02g0947 524 Pfam Protein kinase C terminal domain 419 463 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0947 Amo-Chr2 14688502 14695376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0947 1 477 AGC Kinase Gene Family AT2G20470 77.600 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Amo02g0947 Pkinase 1.2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0947 K08790 - gmx:100779528 865.914