Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0843 ATGGGTAGTACCAACAACTTGCACCAATTATTGAGATTATTGTGTTTGAATACTGATTGGAATTCCGCAATCTTTTGGAAGCTCCAACATCGTGCTAGGATGATGCTGACATGGGAGGATGCTTACTATGACAATCCTATTGGTAACGACTCCTCTGAAAACTTGCGCTGCCAGAAGACCTTGGAACAGATTGGCAGTGCGAAGTTTTCCCATGACCCTCTTGGATTGGCCATTGCAAAGATGTCATGTCATGTATATTCATTAGGGGAAGGTATTGTTGGACAAGTAGCTGTTACTGGAAAGTATCGGTGGATCCGTGCAGATAATCTAGTTGCTGACTCTAGCATAGCTTTTGAGTTTGCTGGTGCATGGCAATCTCTGTTTTCTGCTGGAATTAGGACCATTGTCGTTGTAGCAGTAATCCCACTTGGAGTTGTTCAGCTTGGCTCTTTAAATAAGGTTACCGAAGATATGGCAGTTGTAACTAATATAAGAAATCTCTTTTTGTCTACTCAAGATTACACATTAGACTATACACCGAGTCAAATACAAAGTAGCCCCAAAAGCTCTCCATCTCCGGTGGATGCATGTACAAAAGCTTTGTCTTCGAAACTTATGCCTGCATACTTACTTGATACTGAGAACACCATGAAGAGTGAAACACCATATATGTTAATGCCGTTTCAATGTTCCAGGAAGAACGATTCACCTCAAGATATTTATCAGAAAATGTCTGTTGATGTTGCCAAGCACGAGGGATCTGAAATTGGCAAGGACAGAAGTTCCATTTTGCTTCAGTCAATATCAAATATGATGAATCCGGAGTGTCAAAAATTCGTGGAAATGGAACCTGTAAATGAGAGGAAGTGCGAAGGAATGAATATAAGTGTGGAATCAGAAAGAAAACTCTCATCATTTCCACACAATATGGTTATGGATAATACAAGCTTCAATGATTTGATGCATCCTTTGGAAAAAATCGGAGCTGATTCTGCATACCCTTCAGACTTTCTTGATGCAGTTGTTTATGCAAGTGACAAGTTAAATTGTGTAGATATCAACCAAAATGGGGTGTCAAATGTGCCGAGGTATTCAGATGCAAACTCTCAAAACAATATAGAGAAGTCAAAGTTTAAGAGTGAGCCTTGTTATAATGATGCCGCACACTCGTTGAAGTTTCCTGTCGGCTGTGAACTACATGAAGCCCTTGGGCCTGGTTTTCTAAAAGGAAGTAACTATTTTGATTCGGCAGCTCAGGTTAAACAAGATGATAGGAATGTTGAGGTGCTAGACGAGATTAGCAGTAGCCAGTTGACTTCGCAATCCCATCCAGAGCATCTTCTGGAAGCAATGGTAGCGAACTTATGCAGGAATAGTAATGATATTAACGGCGAGGTATCATTTTCTACTTCAATGCCATCCGCAATGGCCTCAGGACGAAATACTGAAACTTCTATTCACTCTATGCACACTATTAACTCAGAAGGCTATTCGATAGATCAGTCGCCTCTTGTCAAAGAGGAGAAACAGCGCAGCTTGAGTTCCTCGGCAATATGTGGCGTGATGTCCCCAAAAGGATTTTCTTCTCCATGTCCAAGTTCATGTAGTGAGCAATTTGAGAGGTCTTCCGAACCAGCTAAGAACAGCAAGAAAAGGGCTAGGCCTGGGGAAAGTTGTAGGCCAAGGCCAAGGGACAGACAGTTGATCCAGGATCGCATTAAGGAGTTGAGAGAATTGGTGCCGAACGGAGCTAAGTGCAGTATCGATTCACTACTTGAGTGCACGATAAAGCACATGCTTTTCCTCCAGAGCGTAACTAAGCATGCTGACAAGCTAAATAAAGTTGAGGATGCATCAAAGACAAAGCGGCATCACATGGAAACGGATAGTCTCGGTACCTCTAGTTATCAACAGGGTTCAAGTTGGGCAATGGAGGTAGGAGGCCATCTGAAAGTTCGGTCGATATTGGTCGAGAATCTGAATAAGAATGGACAGATGCTGGTTGAGATGTTGTGTGAAGAGTGCAGCCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTGGGCCTGACGATTTTGAAGGGTGCAACCGAAGCTCGCGGTGAGAAGACGTGTCTATGTTTCGTGGTTGAGCAGGGTCAAAACAACAGAAATTTACACAGATTGGATATCTTGTGGCCACTTGTTCAGATACTGCAATCAAAGAGCACAATACATTCACAATAA 2226 0.4236 MGSTNNLHQLLRLLCLNTDWNSAIFWKLQHRARMMLTWEDAYYDNPIGNDSSENLRCQKTLEQIGSAKFSHDPLGLAIAKMSCHVYSLGEGIVGQVAVTGKYRWIRADNLVADSSIAFEFAGAWQSLFSAGIRTIVVVAVIPLGVVQLGSLNKVTEDMAVVTNIRNLFLSTQDYTLDYTPSQIQSSPKSSPSPVDACTKALSSKLMPAYLLDTENTMKSETPYMLMPFQCSRKNDSPQDIYQKMSVDVAKHEGSEIGKDRSSILLQSISNMMNPECQKFVEMEPVNERKCEGMNISVESERKLSSFPHNMVMDNTSFNDLMHPLEKIGADSAYPSDFLDAVVYASDKLNCVDINQNGVSNVPRYSDANSQNNIEKSKFKSEPCYNDAAHSLKFPVGCELHEALGPGFLKGSNYFDSAAQVKQDDRNVEVLDEISSSQLTSQSHPEHLLEAMVANLCRNSNDINGEVSFSTSMPSAMASGRNTETSIHSMHTINSEGYSIDQSPLVKEEKQRSLSSSAICGVMSPKGFSSPCPSSCSEQFERSSEPAKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQSVTKHADKLNKVEDASKTKRHHMETDSLGTSSYQQGSSWAMEVGGHLKVRSILVENLNKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGATEARGEKTCLCFVVEQGQNNRNLHRLDILWPLVQILQSKSTIHSQ* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0843 741 MobiDBLite consensus disorder prediction 532 568 - -
Amo02g0843 741 MobiDBLite consensus disorder prediction 543 568 - -
Amo02g0843 741 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 5 741 - -
Amo02g0843 741 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 5 741 IPR043561 GO:0003700|GO:0006355
Amo02g0843 741 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 168 IPR025610 -
Amo02g0843 741 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 553 602 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0843 Amo-Chr2 12366538 12373906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0843 1 736 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.722 1.59e-157 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0843 - - adu:107473585 1456.81