Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0825 ATGACAGGTTCTGGTTCTCCTTGTGGTGCTTGCAAGTTCTTGAGGAGAAAATGTGTGAGAGGTTGTGTTTTTGCACCTTACTTCTGCCATGAACAAGGTGCTACCCATTTTGCAGCCATTCACAAAGTGTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCCCATCTTCCGGTCGGCGACCGCTGCGAAGCGGCCGTCACAATTTCGTATGAAGCTCAGGCAAGGCTTCAAGATCCTATCTATGGCTGTGTCTCTCATATATTTGCCCTTCAGCAACAGGTGGTGAATTTACAAGCACAGCTAACATATCTAAAGGAACAAGCAGCACAACAAAGTTGTGTGAATGGTGGAAACCCTAATAATGAGAGATACTTTGATAAACCTAATATTGCTGATAACAACAACAATAATTTCATTACTCCTCAAGATCTTCAAAGTTGGTTGTTCAATATGGAAAATTCTTCATCTTCAAACTTGGGTGGCCTTGAATCTCTTCATCCAAATTTGTGCAACAACAATGATTCTTCTTATAATGGTATTAGTGATGGAAACAACAACAACAACAATGTTAATAATTCCATGATGATGATGATGGATCTAAAGCCAATTAATAATAATGGGAGTTACTATGAAAATTCAAACTCATTCTCTAGCTTTGAAGAGAGTTCTTCAAACTCCATGTCCTATGAGATGGAAACAAATGGTGGGACAAAATGGTCTTTTCATGAAGTTGATGATCTTCATTCAGTGGCCTTTGGTTACAGAAGATAA 771 0.3917 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVGDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLTYLKEQAAQQSCVNGGNPNNERYFDKPNIADNNNNNFITPQDLQSWLFNMENSSSSNLGGLESLHPNLCNNNDSSYNGISDGNNNNNNVNNSMMMMMDLKPINNNGSYYENSNSFSSFEESSSNSMSYEMETNGGTKWSFHEVDDLHSVAFGYRR* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0825 256 Coils Coil 87 107 - -
Amo02g0825 256 ProSitePatterns EF-hand calcium-binding domain. 132 144 IPR018247 -
Amo02g0825 256 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Amo02g0825 256 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 255 - -
Amo02g0825 256 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Amo02g0825 256 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0825 Amo-Chr2 12042803 12044160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0825 7 122 AS2 family AT3G58190 81.897 6.26e-69 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo02g0825 LOB 9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0825 K13945 - gmx:100776678 271.166