Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0809 ATGGTGGACTTGCTGTCAAATAGTGATAAGCCTATTCTATCTGGATGCTCTGTTGGAGGATTGGCTGCTATATTGAATTGCAATCGCTTCAAATCCTTCCTACCAAATGGCGCCAGAGTGAAATGCGTGCCAGATGCCGGCTATTTTATCCATATACCAGATGTCTCCGGAACAAAGCACATTGAAAATTTTTACAAAGGAGTTGTTGAAACTCATGGATCAACAAAGTATTTGTCCAAGTCCTACACTTCAAAATATGGTGCTGGCCTGTTCTTGGCTATTGGTAAGGTGAAACTTGAAAATACCATCTTTGAAATCTGA 321 0.405 MVDLLSNSDKPILSGCSVGGLAAILNCNRFKSFLPNGARVKCVPDAGYFIHIPDVSGTKHIENFYKGVVETHGSTKYLSKSYTSKYGAGLFLAIGKVKLENTIFEI* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0809 106 PANTHER PECTIN ACETYLESTERASE 7 5 90 - -
Amo02g0809 106 Pfam Pectinacetylesterase 5 86 IPR004963 GO:0016787
Amo02g0809 106 PANTHER NOTUM-RELATED 5 90 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0809 Amo-Chr2 11742744 11743866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0809 1 84 Carbohydrate Esterase AT5G45280 57.143 3.88e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0809 K19882 - egr:104444195 103.219