Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0774 ATGGATGATTCAACCTCAGATTGTCAGCTCAATCATGGTGAAGTGGATTCAATCTCAGATTGTCAGCTCAATCACGGTGAAGTGAATTTTGAATTTGAATCGAACGAAGTTCCTAAGCCCCTCTCTGTTGTTGATGAGCAGCTTGTTCCCAAGGTTGGAATGACTTTTAAAAAGCTTGAAGATGCTGAAAAATTTTACAAGGACTATACCAAGGCTGCAGGTTTTTCTACAAGAGTTCGAAGCACAAATAAAAAGGGATATGAAATTAAGAATCAATTGATCACATGTAGCAGAGAGGGAAGATGGAAATCTAAAATATCTCCGACCGAGAAGACAAATCCCACAGTTGGTGTTAATTATCCTGCAAGAATTTATATACACACATTGAAGGATGTTGGTGCTTGGATCATTTCGAAGGTTGTGCTGCATTATTCACACCCCTGCTGTCCAACTCAAGCAGAGATGCTCAAACAACACAGGGAACTCAGCATGTCCGTTCGTCGTACAATAGAGAATAACGAGGAGCACACAAAGGAGCGAAAGCATGCATTTTTTTTTAACAAGCTTATCACCCCTAACAACTCGCTTATTCAATTTGTCAAACAATACAATAATTGCCTCGGAAGCAGGGAGCAAGCAGAGAGAGAATCAGATGCTGCAGATTTTCATACGGTCATACCATGTGCAACCAAATCCTCCACTGAAGCTCAGTTTCAAGATGTAGGAAAGGCAAATTACATCACTAGATTAACAAATTCCGCTCTAGACTATTCAGTATATGAAGTTGGAGAACAAGTTTTTAGCTCAATATTCAACAAGTTTATGGTTACTTACGACTTAGTAGCAGCCGAGGTAAAATGTCAATGTTTATTATTCGAGTCAATAGGGATATTGTGCCGTCACGCACTAAGCGTGTTAAGCTTTGAACGAGTAAGCCAAGTGTCACCCAGATATATATTGGAACGATGGAGCAAGAAGCCAATGTTGGAGCTAAGAAGCAAGAGGTTTGACGAATTGGTTTTTTGTTCGCAAAATATTTGCGAATTTGCATCAGAATCGGACGAGTTGACTGCCATTTTGCACCGTGCGTACGATAACGTCATGGTTGAGATGGAATCATTGAAAGCTAAAAGGAAGGGCACATCTTCTTTATCTCACGAAGACGCCAACTTGGAATCCGTTAACGAGCTTCAAAGCCCTCCAAGGATTCGAACAAGAGGACGTCCAAAAAATAGGCTAGGTTCAAAGTTGGATACAAACAGATTGCAAATGCCACAAAGAAGAAGAAAACAAAAGGTTTTAAACAAGGTAAAAGTGATGTTCTTTAAATATGTCGTGATTGAATTTATTCTCGTTAATAGTTTAGCTAATATGTGA 1377 0.3951 MDDSTSDCQLNHGEVDSISDCQLNHGEVNFEFESNEVPKPLSVVDEQLVPKVGMTFKKLEDAEKFYKDYTKAAGFSTRVRSTNKKGYEIKNQLITCSREGRWKSKISPTEKTNPTVGVNYPARIYIHTLKDVGAWIISKVVLHYSHPCCPTQAEMLKQHRELSMSVRRTIENNEEHTKERKHAFFFNKLITPNNSLIQFVKQYNNCLGSREQAERESDAADFHTVIPCATKSSTEAQFQDVGKANYITRLTNSALDYSVYEVGEQVFSSIFNKFMVTYDLVAAEVKCQCLLFESIGILCRHALSVLSFERVSQVSPRYILERWSKKPMLELRSKRFDELVFCSQNICEFASESDELTAILHRAYDNVMVEMESLKAKRKGTSSLSHEDANLESVNELQSPPRIRTRGRPKNRLGSKLDTNRLQMPQRRRKQKVLNKVKVMFFKYVVIEFILVNSLANM* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0774 458 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 170 IPR031052 GO:0006355
Amo02g0774 458 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 177 393 IPR031052 GO:0006355
Amo02g0774 458 MobiDBLite consensus disorder prediction 380 418 - -
Amo02g0774 458 ProSiteProfiles Zinc finger SWIM-type profile. 274 310 IPR007527 GO:0008270
Amo02g0774 458 Pfam FAR1 DNA-binding domain 64 149 IPR004330 -
Amo02g0774 458 PANTHER OS03G0843700 PROTEIN 39 170 - -
Amo02g0774 458 PANTHER OS03G0843700 PROTEIN 177 393 - -
Amo02g0774 458 MobiDBLite consensus disorder prediction 386 400 - -
Amo02g0774 458 SMART 26again6 285 312 IPR006564 GO:0008270
Amo02g0774 458 Pfam SWIM zinc finger 283 307 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0774 Amo-Chr2 11025062 11027565 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo02g0774 FAR1 7.2e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0774 - - adu:107484182 400.979