Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0773 ATGGTTCGTCGTTCTCGAGGGCTCTCGATCCCCTTGTTCACCAATGTTTGCTCTCTTGTCCTGTTTGAAGCGTCCCCGCGTGTTCAGTCTCGCTGCATCCCGCGAGTGCTGGAGGGCCGCCACGTGCTCGGCATCGATGAAACTGGCAGCGGTAAGACCGCCGCTTTCGCCCTCCCGATCCTCTACCGCCTGTCGGAGCACCCGTTCGGTGTGTTCGCGTTGGTGGTGACGCCCACTAGGGAGCTGGAGTTCCAGCTAGCAGAGCAGTTCCGCTTAACTGAGATAATTAGCAATTCCAAACAGCCATCTGAATGGCATCCAAAGAGCCACTGGTGA 336 0.5774 MVRRSRGLSIPLFTNVCSLVLFEASPRVQSRCIPRVLEGRHVLGIDETGSGKTAAFALPILYRLSEHPFGVFALVVTPTRELEFQLAEQFRLTEIISNSKQPSEWHPKSHW* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0773 111 Gene3D - 4 100 IPR027417 -
Amo02g0773 111 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 33 111 IPR014001 -
Amo02g0773 111 Pfam DEAD/DEAH box helicase 27 91 IPR011545 GO:0003676|GO:0005524
Amo02g0773 111 PANTHER ATP-DEPENDENT RNA HELICASE DDX49-RELATED 15 92 - -
Amo02g0773 111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 92 IPR027417 -
Amo02g0773 111 PANTHER RNA HELICASE 15 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0773 Amo-Chr2 11020264 11020599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0773 22 100 Eukaryotic Initiation Factors Gene Family AT5G11200 37.500 8.44e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0773 K14778 - gmx:100798597 122.864