Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0756 ATGGCAGACATGTATGAGAATCAAGCATCTCCTGATGTCTCAAATTATGCATCAAGTAGTGGAATCTCTTCTGGGGATGATAATAAAGGGATTGGTTATAGAGCTGCAAAATCAAAGCATTTATATCTTTTGGGTAGCAATTCTTGGTTTCAATGCTTTCCCTTCAAAATTGATCTCAATTTTGTTCGTATGGTGATGGCAGAGGTGATTGGAACATTTATTTTGATGTTCTGTGTAAGTGGAATAATAGCAAGCACAAAATTCCAAAGTGGTGAAGTGGGGCTTCTAGAGTATGCAGCCACAGCAGGATTAACAGTGGTTGTTATCATCTTCTCCATAGGACCAATTTCTTGTGCACATGTCAACCCAGCTGTCACAATTGCCTTTGCCACAATTGGTCATGTTCCATGGTACAAGGTTCCAATTTACATAATAGCACAGATAGTAGGTTCTATATTTGCCACATTTATAGGTAGCCTTGTTTATGGCATAAAATCAGAGGTTATGATCACAAGGCCAATCCAAGGTTGCAACTCTGCATTCTGGGTTGAACTCATTGCAACTTTCATCATCATGTTCCTTGTTGCAGCTTTGACATCTGAGTATGAATCAGTTGGGCATTTATCTGGCTTTGTTGCTGGAATTGCAATTGGTCTTGCTGTACTAATCACAGGGCCTGTGTCAGGTGGATCAATGAACCCTGCAAGATCATTAGGACCAGCAATTGTTTCATGGAAATTCAAGGACATTTGGATATACATGATAGCACCAAGTGGTGGAGCCATAGCAGGAGCTCAAACCCTTCGTTTTCTTCGCCTTAATAAGGACCAACCTTGCAACACCGATAATGATTATGCATTTATATTTGTAATCAACTTTATAGATATATATATAGAATTAAATTAA 906 0.3885 MADMYENQASPDVSNYASSSGISSGDDNKGIGYRAAKSKHLYLLGSNSWFQCFPFKIDLNFVRMVMAEVIGTFILMFCVSGIIASTKFQSGEVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATIGHVPWYKVPIYIIAQIVGSIFATFIGSLVYGIKSEVMITRPIQGCNSAFWVELIATFIIMFLVAALTSEYESVGHLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWKFKDIWIYMIAPSGGAIAGAQTLRFLRLNKDQPCNTDNDYAFIFVINFIDIYIELN* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0756 301 MobiDBLite consensus disorder prediction 1 24 - -
Amo02g0756 301 MobiDBLite consensus disorder prediction 8 24 - -
Amo02g0756 301 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo02g0756 301 PRINTS Major intrinsic protein family signature 102 126 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo02g0756 301 PRINTS Major intrinsic protein family signature 139 158 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo02g0756 301 PRINTS Major intrinsic protein family signature 63 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo02g0756 301 PRINTS Major intrinsic protein family signature 214 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo02g0756 301 PRINTS Major intrinsic protein family signature 183 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo02g0756 301 Pfam Major intrinsic protein 60 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo02g0756 301 ProSitePatterns MIP family signature. 120 128 IPR022357 -
Amo02g0756 301 Gene3D Glycerol uptake facilitator protein. 53 286 IPR023271 -
Amo02g0756 301 PANTHER AQUAPORIN NIP2-1 10 281 IPR034294 -
Amo02g0756 301 PANTHER AQUAPORIN NIP7-1-RELATED 10 281 - -
Amo02g0756 301 SUPERFAMILY Aquaporin-like 58 278 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0756 Amo-Chr2 10740241 10745807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0756 37 276 Major Intrinsic Protein MIP AT4G10380 41.057 5.39e-54 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0756 K09874 - mtr:MTR_1g070385 427.943