Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0750 ATGGAGGAAGTTGAACAAGCTAATAGATTAGCTGTTGAAAGCTGTCATAGAGTTCTTAGTATTTTGTCTCAGCCAAGGGATCAAGTTCAGAATAGGAATTTAATGGTGGAAACTGGTGAAGCTGTGTTAAGGTTCAAGAAAGTTGTTTCTTTGCTTCACAATGGTTTGGGTCATGCAAGAGTGAGGAAGCATAGAAAGCTTCAAGTACCCTTTTCTCAAAGCATACTCTTAGATAACCCGAATTGCTTCAAGAACAACAACAACAACCTTAACCATGGTCAATCAAAGAAAGTAGTGATGCTTCATGAGAATTCAGTTCAGGAATTGGGATCAAGTACGGTTAGGAACTCACTTTCTTTGGTGAATCCATCTTTGGAATTGAGCTCAAGTGCCAAAAGTACTATTAACCAACAAGGTTCTTCATCTAGTCACTATCAGTTCCTTCAACAGCAACAAATTCAGCAACAAAGGTTGTTGATGCAGCAGCAACAGCAGCAGCAACAAATGAAAAATCATGCTGAGATGATGTTCCGAAGGAACAACAGCGGCATAAACCTCAATTTCGACAGCACTAGCTGCACGCCGACAATGTCTTCTACTACTAGGTCTTTCATTTCTTCCTTGAGCATAGACGGAAGTGTGGCGAACCTGGACGGAAGTTCCTTCCATCTTATAGGAGCTCCACTCTCTTCTGATCAAAATTCGCAACAGCATAAGCGAAAATGTTCCGCTAGAGGCGACGAGGGCAGTGTGAAATGTGGAAGCAGTGCTAGATGTCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATTAAGGTGCCAGCTATCAGCAACAAACTTGCAGATATACCTCCTGATGATTATTCATGGAGGAAGTATGGACAGAAACCAATCAAGGGTTCTCCTCACCCAAGGGGATATTACAAGTGCAGCAGCATGAGAGGGTGCCCTGCAAGGAAGCATGTAGAGAGGTGCTTGGAAGAGCCAACAATGCTAATTGTTACCTATGAAGGAGAGCATAACCATCCAAAGTTACCAACACAATCTGCAAATGCATGA 1065 0.4235 MEEVEQANRLAVESCHRVLSILSQPRDQVQNRNLMVETGEAVLRFKKVVSLLHNGLGHARVRKHRKLQVPFSQSILLDNPNCFKNNNNNLNHGQSKKVVMLHENSVQELGSSTVRNSLSLVNPSLELSSSAKSTINQQGSSSSHYQFLQQQQIQQQRLLMQQQQQQQQMKNHAEMMFRRNNSGINLNFDSTSCTPTMSSTTRSFISSLSIDGSVANLDGSSFHLIGAPLSSDQNSQQHKRKCSARGDEGSVKCGSSARCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPTQSANA* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0750 354 Gene3D WRKY domain 272 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo02g0750 354 ProSiteProfiles WRKY domain profile. 281 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo02g0750 354 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 353 - -
Amo02g0750 354 MobiDBLite consensus disorder prediction 228 247 - -
Amo02g0750 354 SMART WRKY_cls 286 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo02g0750 354 Pfam Plant zinc cluster domain 239 284 IPR018872 -
Amo02g0750 354 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 353 IPR044810 GO:0003700
Amo02g0750 354 SUPERFAMILY WRKY DNA-binding domain 284 346 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo02g0750 354 Pfam WRKY DNA -binding domain 288 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0750 Amo-Chr2 10658559 10661453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0750 1 351 WRKY Transcription Factor Family AT2G30590 57.441 3.66e-130 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo02g0750 WRKY 5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0750 - - gmx:100170681 524.628