Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0735 AGGAGCTACTTTGCCACCACCAAAACAAAACAAAGCTCCACTTTCACTTCCTCTTTATCACCTTTATCCTCAGCTATCTCCCATTTTTGGGTATTTTCTTTTAAAAAAATGGAGAAGTATGAGATTCTTCAACAGATTGGCAAAGGTTCCTTTGGTTCTGCTCTTCTTGTTAGGCACAGACATGAAAACAGAAAGTATGTACTCAAGAAGATCAAACTTGCTCGCCAAACTGACAGAACTCGTAGATCTGCTCATCAAGAGATGGAACTCGTCTCTAAAGTTCGAAATCCATTTATCGTGGAATATAAAGATTCCTGGGTAGAAAAGGGTTGTTTTGTATGTATCATCATCGGCTATTGTGAAGGCGGAGATATGGCTGAAGCTATAAAAAAGTCTAATGGTATTCATTTTTCTGAAGAGAAGCTTTGTAAGTGGCTTGTTCAACTGCTGATGGCACTTGATTACTTGCATGCAAATCATATTCTGCACCGTGATGTCAAGTGTTCAAATATATTCTTGACAAAAGATCAAGATATACGTCTAGGTGACTTTGGTCTTGCTAAAATGTTGACATGTGATGATCTTGCTTCCTCGGTTGTCGGGACTCCAAGTTATATGTGTCCAGAGCTTCTTGCTGATATACCTTATGTCTCTAAGTCAGATATCTGGTCTTTAGGATGCTGTGTTTATGAAATGGCTGCACATAAGCCAGCTTTCAAAGCTCTTGATATGCAAACATTGATTAATAAAATAAACAAGTCTTTAGTGGCTCCACTACCAACCATGTATTCCAGTCCATTTCGAGGGCTTGTCAAGAGTATGCTGCGGAAAAATCCAGAGCTTAGGCCAAGTGCTGCAGATTTATTAAATCATCCACATCTTCAGCCTTATATTCATAAAATTCACCTGAAACTCAATACCCCAAGAAGAAGTACTTTTCCCTTCCAGTGGCATGATTCGAGTTACTTAAGGAGAAACCGCTTTTTCGAGCCAGAATCTGTTTCTACTATTTCAGACAGATACAAAAGATTATCCTTTAGCAATGACAGAGCTTTGAATCCTAGTATTTCTGGAACTGAAGTAGGTTCTCTCTGTTCTGCTCAAAGAGCACAAGGATCCTTCACTTATTCAAAAGAGAGATTGTATGATCTTTCTGTTGGTTGTGTCCGGGAAGAGTTGAATGCTAACAAGTCGAAAGCAGCAAAGTTCTCAGCTTTCGACAGGACACCAAGATCGCAAGCAGGGAAGATTTCCACCCCGAGACGGCCGATAATACCGTCGATATCACATACTAGCTCCAAGCGTGATTCACTTCCAGCATCTCCGGCCGCAAAGTTCGCCCCACCAACTCGTCGAGCATCTCTTCCACTTCTTACACCTTCAACTGGAGTCATGGCAACAGCTACCCCTTACAGAGCTAGCGTTGGCCTTCTAAGAAGCCTGGACTCACCAGATATTTCTGTCAATGCACCACGAATCGACAAGATGGCAGAGTTCCCTCTAGCATCCTGCGAGGGCAATCATTTCTTCCCCGTTCGTGGCACCTCATCAACGTCGGCTCATTGCTCGTCTAGCTCCCCCGGTAGCGCCGAATGCTCATTCACAAAAGACAAGTGTACAGTCCAAGTTGTGGACAAGGCCAGTGTCCCTACTATTACCACTGGTGTTAATAGCACTCCAGCTCCGGTCTCTCACGGCAGCGAATGCTCTGAGCCCGGGGCAACCATTGTTTCAAGCCATTCCTCGGCTGACTCTCGTCAGCGCAGGTTCGACACCTCGTCGTACCAGCAGCGCGCGGAGGCGTTGGAAGGGTTGCTGGAGTTCAGTGCAAGGCTCCTACAGCAACAGAGGTTTGAAGAGCTTGGTGTGTTGTTGAAACCATTTGGACCTGAGAAGGTTTCACCAAGGGAAACAGCTATTTGGTTGACTAAGAGCTTCAAAGAAACTGCGGCATAA 1956 0.4427 RSYFATTKTKQSSTFTSSLSPLSSAISHFWVFSFKKMEKYEILQQIGKGSFGSALLVRHRHENRKYVLKKIKLARQTDRTRRSAHQEMELVSKVRNPFIVEYKDSWVEKGCFVCIIIGYCEGGDMAEAIKKSNGIHFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTCDDLASSVVGTPSYMCPELLADIPYVSKSDIWSLGCCVYEMAAHKPAFKALDMQTLINKINKSLVAPLPTMYSSPFRGLVKSMLRKNPELRPSAADLLNHPHLQPYIHKIHLKLNTPRRSTFPFQWHDSSYLRRNRFFEPESVSTISDRYKRLSFSNDRALNPSISGTEVGSLCSAQRAQGSFTYSKERLYDLSVGCVREELNANKSKAAKFSAFDRTPRSQAGKISTPRRPIIPSISHTSSKRDSLPASPAAKFAPPTRRASLPLLTPSTGVMATATPYRASVGLLRSLDSPDISVNAPRIDKMAEFPLASCEGNHFFPVRGTSSTSAHCSSSSPGSAECSFTKDKCTVQVVDKASVPTITTGVNSTPAPVSHGSECSEPGATIVSSHSSADSRQRRFDTSSYQQRAEALEGLLEFSARLLQQQRFEELGVLLKPFGPEKVSPRETAIWLTKSFKETAA* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0735 651 ProSiteProfiles Protein kinase domain profile. 40 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0735 651 MobiDBLite consensus disorder prediction 557 589 - -
Amo02g0735 651 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Amo02g0735 651 PANTHER SERINE/THREONINE-KINASE NEK4 37 640 - -
Amo02g0735 651 SMART serkin_6 40 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0735 651 MobiDBLite consensus disorder prediction 409 447 - -
Amo02g0735 651 CDD STKc_Nek 39 294 - -
Amo02g0735 651 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 37 640 - -
Amo02g0735 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Amo02g0735 651 Pfam Protein kinase domain 40 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0735 651 Gene3D Phosphorylase Kinase; domain 1 23 119 - -
Amo02g0735 651 MobiDBLite consensus disorder prediction 557 583 - -
Amo02g0735 651 SUPERFAMILY Protein kinase-like (PK-like) 37 355 IPR011009 -
Amo02g0735 651 MobiDBLite consensus disorder prediction 424 438 - -
Amo02g0735 651 Gene3D Transferase(Phosphotransferase) domain 1 120 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0735 Amo-Chr2 10421141 10427089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0735 46 295 MAP Kinase Kinase Kinase AT1G53570 30.588 3.45e-36 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Amo02g0735 Pkinase 1.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0735 K08857 - gmx:100810347 957.207