Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0729 ATGCTTCACGCTCCACGACAATCATCGCTTCTCTTCGTTTCCTTCTTAGGGTTTCTTATTCTTCTTTCCATAATCAAAATCCCTTGCGTTCGCGGAGAGTCTTCCACTTGCTTGACGGTTTACAGAAACGGCGGTGCTCCCGCGGTCTTTAAATCCCCGAAATGTCCCCGATGGAAGCTTCCCGAAGGCCAAGGTGAAGACGACGATTCCGATTACCACCGTAGTCGCCGATCTCCGCCTCATGCGACGCCGCGTTGCCAGTCCGCCATGCTCCAGGGCAGCCGTTCCTCCCAGGAGGACCGCACTCTCTGCGTCCTCGATCTCCGGATTCCGTTTCCCGATGCGGATGGGATCAGGGAGGTTGCGGTGGGAATCGTGGCAGTTTTTGACGGGCACAATGGTGCTGAAGCTAGTGAAATGGCGTCAAAGCTTCTGATGGAGTATTTTGTATTGCACACCTATTTTTTACTTGATGCAGCTTTTTCTGTTATATCAAAAACAAGGGGAGCAGTGCATCACCAGAGAGAGCACAATCGTTTGAACATGATGCGTAGGTGGAAGGAGATTCTAGGTTGGCATGAGCTGCATTTTGAAAGGTTCCAAAATACATTTTCTGCAAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAGGAAGCATTATTGAGAGCTATCCATGATATTGATGCAAAATTTTCTGAGGAAGCCTTCAGAAATAGTCTTCATTCAGGGTCTACGGCAATCATTATATTGATGGCAGATGATAACATTTTAGTTGCCAATATTGGAGATTCTAAGGCTTTCTTGTGCTCTGAAAATTTTCAGTCTCCTAGAGAGGCCAAAGACTTATTACTGAAGCAATATAGGCAGAAAGAGCTTGATGGTTCTGTTGCTGTGTGGAATCGTGAAAAGTATAAGTTAGCTTCCTCCCATGGACTGACTCATTTTGCTGTAAAAGAATTGACCAGTGATCATCACCCAGACAGAGATGATGAAAGGATTCGGGTGGAAGCAGCTGGTGGGCAAGTTATAAATTGGGGGGGAGTGCCTCGTGTAAATGGCCAGCTGGCTATTACACGGGCAATTGGTGATGTATTCTTTAAAAGGTACGGTGTTATATCTGTGCCAGAAGTGACTGATTGGCAGCCTCTGACTGCCAATGATAGCTATTTAGTGGCTGCATCCGATGCAGATCTCATTGTCAACACTGCCTTGGGAAAGGGCAGTACGGATAATGTGGCCGCCATTGTTGTTCCTCTGGAATCTGCCAAAGTTTCTGCAAACTCGCTTAGGAGAAGCTATATTGAGAAGAGGGATGCTGATTATCCTCTGCTTGCATTGCAGGAACTTGCTTCAAGAAGTTTAGCTAATGATGTCATATCTGATGTAATGCACTTGAGGCATCCTCATGCGGTGGATACCAAGTTTAAGCGTATATTGGTTGAAGTGAAACATGGAGATTTTGGATGTTTTTATTTGTCTGAAAATCTTGATGAACTTGTGGACTCTAAGCAGCCTACCAAAAGTACTGACTGGGAAGATTATTTATATGAACTACCTCAGCCTGTACCAGATACACATCAACATTCTGTAAATGGTCCAGTATATTTGTATGATAACCAAAACTTCTGCTTACAACTTGGTCCGACTGTTAATGAATCTAAGGAACAATGCATAAATCCTGAAGCATTTGCAAATTTTATTGGTCTTCTTGAATCAATTCCTTTACATGATACTGGTTCACATAATGGATCCTCTGGTTATTCAATGCCTGAATCAAGGTACAAACTAAAGAAGAGTTTCGGTCGTGGATCATATGGTGAAGTATGGTTAGCTTTTCATTGGAATTGTAATGAAGGGATTAATGCTGCAGAAATGAGCAACAATGACAATAATAGAAACGACAGCTCAAACACCAATGATTTCCAGGATGCTTCCACTAACTATACTCTGTACATTTTGAAGCGTATAATGGTAGAGAGAGGGTCTGCTGTTTACTTAAGTGGCCTGAGGGAGAAATATTTTGGAGAAACTTTTTTAAATGCCTCGTCAAGCTTTGAAGATCTGCTATCAGCTGAAAAACCAAACTGTCTCTTGGAAACATCACAATTTGGGTTTGAGAATACATTTTCAAACAGGTCAAAAAGATCTGTATATGAAGAAGGCTTGAACCATATTGTAAGATATGTGGAGTCTTTTGAATCTCGGTCCAATGAAATTTGGCTTGTATTCAGTTTTGAAGGCATATCGTTGTCTAAACTTTTGCATACTGTGGAAGATCCATATGATACTGCTGAGAAAGAAAAGACTGAGCAAGTAAAACATGTCCAAATACTGCGTCCATCGAAGTGGTGGCATTGGTTGAAAACAACAGAAGAAGGGCAAGAGGAAATGCGCAACCTTATCTGGCAGCTGTTTCTGGCGCTGAAATCTTGTCACGATCGCAATATTACACACAGGGACATTAAACCTGAAAATATGGTGATATGCTTTGAAGATCAGGAGACTGGAAGATGTTTGAAAGATATACCGACTAAACTAAATAGTTTCTCCACCAAAATGCGTGTTATAGACTTTGGCAGTGGAATTGATGAATTCACATTGAAGCATTTATATGGTTCAACTGGGCCTTCTAGGTATCTCACTTCTCTCTCTTATACACCTCCTGAAGCTTTGCTAAATGCTACGTGGTATCAAGGCCCAACAAGCTCAACTTTGAAATATGACATGTGGAGTGTTGGTGTTGTAATGTTAGAGTTGGTCTTAGGGACACCAAATGTTTTCCAGATCGATGCTTTAACACAAACTCTTTTGGACCAGCATCTTGACGGCTGGAATGAGGACTTCAGATCATTCATGGAATTGTGTATCTTAATCCCTGAGATATCCAGAAGTTCCTCAAAAAAGTATCACAGAGCTAACCAGGCTGGCGTTTCACCTGCATCTTGGAAATGCTCGGAAGAATTCTTTTCTCATCAAATAAAGAGTCGAGATCCTCTTAAAATAGGTTTTTCAAATATCTGGGCTTTGCGGTTAGTGCGCCATCTGTTACAGTGGGACCCAGAGGACCGGATAAGCGTTGATGAGGCATTGCAGCATCCCTATTTCCAACCTCCCCCGAGAGGATGA 3129 0.4228 MLHAPRQSSLLFVSFLGFLILLSIIKIPCVRGESSTCLTVYRNGGAPAVFKSPKCPRWKLPEGQGEDDDSDYHRSRRSPPHATPRCQSAMLQGSRSSQEDRTLCVLDLRIPFPDADGIREVAVGIVAVFDGHNGAEASEMASKLLMEYFVLHTYFLLDAAFSVISKTRGAVHHQREHNRLNMMRRWKEILGWHELHFERFQNTFSANFDDSFHLEILKEALLRAIHDIDAKFSEEAFRNSLHSGSTAIIILMADDNILVANIGDSKAFLCSENFQSPREAKDLLLKQYRQKELDGSVAVWNREKYKLASSHGLTHFAVKELTSDHHPDRDDERIRVEAAGGQVINWGGVPRVNGQLAITRAIGDVFFKRYGVISVPEVTDWQPLTANDSYLVAASDADLIVNTALGKGSTDNVAAIVVPLESAKVSANSLRRSYIEKRDADYPLLALQELASRSLANDVISDVMHLRHPHAVDTKFKRILVEVKHGDFGCFYLSENLDELVDSKQPTKSTDWEDYLYELPQPVPDTHQHSVNGPVYLYDNQNFCLQLGPTVNESKEQCINPEAFANFIGLLESIPLHDTGSHNGSSGYSMPESRYKLKKSFGRGSYGEVWLAFHWNCNEGINAAEMSNNDNNRNDSSNTNDFQDASTNYTLYILKRIMVERGSAVYLSGLREKYFGETFLNASSSFEDLLSAEKPNCLLETSQFGFENTFSNRSKRSVYEEGLNHIVRYVESFESRSNEIWLVFSFEGISLSKLLHTVEDPYDTAEKEKTEQVKHVQILRPSKWWHWLKTTEEGQEEMRNLIWQLFLALKSCHDRNITHRDIKPENMVICFEDQETGRCLKDIPTKLNSFSTKMRVIDFGSGIDEFTLKHLYGSTGPSRYLTSLSYTPPEALLNATWYQGPTSSTLKYDMWSVGVVMLELVLGTPNVFQIDALTQTLLDQHLDGWNEDFRSFMELCILIPEISRSSSKKYHRANQAGVSPASWKCSEEFFSHQIKSRDPLKIGFSNIWALRLVRHLLQWDPEDRISVDEALQHPYFQPPPRG* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0729 1042 CDD PP2Cc 92 420 IPR001932 -
Amo02g0729 1042 Gene3D - 81 428 IPR036457 -
Amo02g0729 1042 Pfam Protein phosphatase 2C 216 396 IPR001932 -
Amo02g0729 1042 ProSiteProfiles PPM-type phosphatase domain profile. 85 420 IPR001932 -
Amo02g0729 1042 ProSiteProfiles Protein kinase domain profile. 595 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0729 1042 PANTHER ALPHABET, ISOFORM E-RELATED 24 396 - -
Amo02g0729 1042 PANTHER ALPHABET, ISOFORM E-RELATED 397 582 - -
Amo02g0729 1042 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Amo02g0729 1042 MobiDBLite consensus disorder prediction 60 95 - -
Amo02g0729 1042 MobiDBLite consensus disorder prediction 81 95 - -
Amo02g0729 1042 SUPERFAMILY Protein kinase-like (PK-like) 592 1038 IPR011009 -
Amo02g0729 1042 SMART PP2C_4 77 418 IPR001932 -
Amo02g0729 1042 SMART serkin_6 595 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0729 1042 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 397 582 - -
Amo02g0729 1042 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 24 396 - -
Amo02g0729 1042 Pfam Protein kinase domain 725 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0729 1042 Gene3D Transferase(Phosphotransferase) domain 1 783 1037 - -
Amo02g0729 1042 MobiDBLite consensus disorder prediction 60 78 - -
Amo02g0729 1042 SUPERFAMILY PP2C-like 83 421 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0729 Amo-Chr2 10319765 10333899 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0729 659 1040 PP2C-type Phosphatase Gene Family AT3G63340 62.660 1.72e-168 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Amo02g0729 Pkinase 3.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0729 - - gmx:100781476 1605.5