Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0637 ATGCCTCGATTATTAACGATGGTGGCTGTAGACAAAGATAAGAACAGTGTTGATGCATTTCGTTGGGCCACTGAGAATATTGATAATCCAATCGTTATTGCTGTTCATGTCAAGGATAAAGAAATTCCTCATCAGGGCAAGAATGTTTTCCCACCTGACGACGAAGATTTAGAAAATATTTTCAATCAATTGCGTCAAGAGTGTCATCCTAAAGTCCTAAAGATGAAAGAAGCTGTAATATATGATAGTGATCCAGTTAAAGCAATAATAGAATATGCAGAAAGGAATCGTGTCCATACCCTTGTTCTTGGTGCACCCACCGGCTCCAACAAGAAGAACACTCTGGCAAAATCTCTTTCTCTTCAATTCACTAAGTCATCAAGCAAGAAAGTGAAAGGCATAGAAGTAGCAACAGGTGTAATGAGAGCAGCACCGGAATACATATCAGTGTATGTAATTAAAAAGGGAAAGATAGTGGCAGCAAGAGCATCAACACACCCATTGATTGGGGCAATACCACCAAGACAATCTAGTGTTGATTCTCTTCAATATGACTTGGAAAATAAAAGGGCATCATTAGTACCACCACAATTGATTAGAGGATTAAGCACCAACAGTTGTAGTAGATCTGAAAGAATAACGAATGATAACATGAGAAGGAGATTTTCAAGGTTGGATTCAATGGCGGAGAGCGTTGACCTAACTAGTTATCGACAAAGGTTATCAATGACCCATGATGAATCATCAAAAGCCTTTGACTTCAATTACTCTCCTTCTAATTGGGTCATTGATGATTCTTCCGACAAAATCTCTCCTATCACAAATTCCCCCCAAACGTTGAAAAGCTCAAGATCCAAAAGAGAAAAGAGTGACGTTGAAGCTGAGATGAATCAATTGAAGCAAATGCTGAAGCAAACTATGGACTTGTACAGTGTAGCTTGCAAAGAAGCAATTGCAGCCCAAAATAAGGCTAGAGAAATTAATCAATGGAAATTGAAAGAGGCGCCTAAGATTGAGCAAGCTAGGCTAGCCGAAGAGGCGGCCATGGCGTTAGCCGAGGAGGAGAAGGCTAAGGCGAAGGCGGCGATGGAAAAGGCGGATGAAGCCATGAAAATGGCTGAAGAAGAAGCAAAGAAAAGAGCAGAAGCAGAGAGGAAGGCTAAATTGGAGGCAGAAGAGAAAGAGAGGGCCTTAAATGTTTTGGCTTATAAGGATTTTAGGTACAGGAAATACACCATTGGGGACATTGAAAAAGCTACTAATAATTTCTCCCTATCATTGAGAATTGGTGAAGGTGGATATGGACCTGTCTTTAAAGGCCAACTTGATCATACCCCTGTTGCTATCAAAATTTTGAGACCTGATGCTTCACAGGGCAGGAGACAGTTTCATCAAGAGGTTGAGGTATTATGCAGCATTAGGCATCCTAATATGGTCCTTCTCCTTGGTGCTTGCCCTGACTATGGATGCTTAGTGTATGAATTCATGGATAATGGTAGCTTAGAAGATAGACTAATCCGAAAAAATAATACCCCTCCTCTCTCATGGCCAAAACGGTTTGAAATAGCGGCCGAGATAGCGACCGCGCTACTCTTTCTTCATCAGGCTAAACCGGAGCCAATCGTACACCGAGATCTTAAACCGGCCAACATTCTCCTCGACCGGAATTTCGTAAGCAAAATAAGTGACGTCGGCCTAGCCAGACTAGTGCCGCCGTCCGTGGCCGACTCCGTGACACAATACTACATGACCACGGCCGCCGGCACCATGCATTATATTGATCCGGAGTACCAACAAACCGGAAAACTAAGAACAAAATCGGATGTATACTCATTGGGAATAATGTTACTTCAAATAATAACGGCTAAGCCTCCATTAGGGTTAACTCATCAAGTTAAAAGGGCAATTGAAAAGGGTCAATTTTCTAATATTCTCGATCCTTCCATAAATGATTGGCCAGTTGAAGAGGCACTAAGCTTTGCTAAATTGGCATTGCAATGTTCGGAGCTAAGAAAAAAAGATAGGCCAGATCTTGGAACAGTTGTAGTGCCAGAATTGGATCGTTTAAGAAACTTTGGATATGAATCAATTGGCCATAACAATATTCTTCCTTTTAGCAACTTCTATCATGCAACATCATTACTCCCACCTCGTTCACCTACACAAGTCATCAACAATATTTAA 2184 0.4139 MPRLLTMVAVDKDKNSVDAFRWATENIDNPIVIAVHVKDKEIPHQGKNVFPPDDEDLENIFNQLRQECHPKVLKMKEAVIYDSDPVKAIIEYAERNRVHTLVLGAPTGSNKKNTLAKSLSLQFTKSSSKKVKGIEVATGVMRAAPEYISVYVIKKGKIVAARASTHPLIGAIPPRQSSVDSLQYDLENKRASLVPPQLIRGLSTNSCSRSERITNDNMRRRFSRLDSMAESVDLTSYRQRLSMTHDESSKAFDFNYSPSNWVIDDSSDKISPITNSPQTLKSSRSKREKSDVEAEMNQLKQMLKQTMDLYSVACKEAIAAQNKAREINQWKLKEAPKIEQARLAEEAAMALAEEEKAKAKAAMEKADEAMKMAEEEAKKRAEAERKAKLEAEEKERALNVLAYKDFRYRKYTIGDIEKATNNFSLSLRIGEGGYGPVFKGQLDHTPVAIKILRPDASQGRRQFHQEVEVLCSIRHPNMVLLLGACPDYGCLVYEFMDNGSLEDRLIRKNNTPPLSWPKRFEIAAEIATALLFLHQAKPEPIVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADSVTQYYMTTAAGTMHYIDPEYQQTGKLRTKSDVYSLGIMLLQIITAKPPLGLTHQVKRAIEKGQFSNILDPSINDWPVEEALSFAKLALQCSELRKKDRPDLGTVVVPELDRLRNFGYESIGHNNILPFSNFYHATSLLPPRSPTQVINNI* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0637 727 Gene3D HUPs 6 154 IPR014729 -
Amo02g0637 727 PANTHER OS02G0152300 PROTEIN 4 703 - -
Amo02g0637 727 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 121 - -
Amo02g0637 727 Coils Coil 282 309 - -
Amo02g0637 727 Pfam Universal stress protein family 7 110 IPR006016 -
Amo02g0637 727 MobiDBLite consensus disorder prediction 265 281 - -
Amo02g0637 727 MobiDBLite consensus disorder prediction 265 291 - -
Amo02g0637 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Amo02g0637 727 ProSiteProfiles Protein kinase domain profile. 423 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0637 727 Gene3D Transferase(Phosphotransferase) domain 1 496 696 - -
Amo02g0637 727 Pfam Protein kinase domain 428 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0637 727 SUPERFAMILY Protein kinase-like (PK-like) 406 682 IPR011009 -
Amo02g0637 727 Coils Coil 349 400 - -
Amo02g0637 727 SMART serkin_6 423 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0637 727 CDD STKc_IRAK 429 689 - -
Amo02g0637 727 Gene3D Phosphorylase Kinase; domain 1 402 495 - -
Amo02g0637 727 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 4 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0637 Amo-Chr2 8387192 8393501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0637 75 693 Receptor kinase-like Gene Family AT5G12000 56.013 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Amo02g0637 PK_Tyr_Ser-Thr 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0637 - - aip:107647694 1327.77