Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0636 ATGTCGACGGTATACGTTTTGGAACCGCCGACGAAGGGGAAGGTGGTTGTCAACACAACGCGGGGCCCACTCGACATCGAGCTATGGCCGAAGGAAGCACCCAAAGCTGTCAGGAACTTCGTTCAGCTCTGCATGGAAGGTTACTACGACAACACCATCTTCCACCGCGTCATCAAGGACTTTCTTGTTCAGGGTGGTGATCCCACCGGCACCGGCACTGGAGGTGAGAGTATTTACGGGGATGTTTTTGCCGATGAGTTTCATTCGCGTCTGAAATTCAAGCACAGAGGATTGGTTGCAATGGCCAATGCTGGGCCACCTAATTCAAATGGGAGTCAGTTTTTCATTACCCTTGACCGTTGTGACTGGCTTGATCGGAAGCATACTATTTTTGGAAAGGTAACAGGAGATACAATGTATAATCTTTTAAGGCTGGGTGAAGTTGAAACTGATAAAAACGATCGGCCTTTAGATCCACCTCCAAAGATATTATCAGTTGAGCAAAAGATTAAGAGCAGTCATGATGTCTTGAATGATCCTCGTCTTTTGAAGGAAGAAACTCCCAACAATGAAATGACTAAAGCAACAAGGGATTTGCAGTTAACTGTAAGAGATGCACTAAAAACCAAGAAGGAAGAGCCTCGGAAAGAGTTAGAAACTAGTAAAATTGATTCCAGTGATGATGACGACGACGACGAAGACGATGGCAATGAAGCAGATTTTGATGCAAGAATGCGCAGGCGAATACTGAAAAAGCGGAAGGAGTTGGGTGACCTTCCTCCCAAGCCAAAGGTGCAAAATGGAAGATCCAGTCCAGAGCGCCGGGATATTTCAGCAGCCAGCAAATCTTCAATGCCTAGAAAGAGAAAGCTCAACATCTTGGGTTCAAAAAGTAAACGTCTAAAAATTGAAAGTGAGGATATGATAGAGCTGAAG 936 0.453 MSTVYVLEPPTKGKVVVNTTRGPLDIELWPKEAPKAVRNFVQLCMEGYYDNTIFHRVIKDFLVQGGDPTGTGTGGESIYGDVFADEFHSRLKFKHRGLVAMANAGPPNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTMYNLLRLGEVETDKNDRPLDPPPKILSVEQKIKSSHDVLNDPRLLKEETPNNEMTKATRDLQLTVRDALKTKKEEPRKELETSKIDSSDDDDDDEDDGNEADFDARMRRRILKKRKELGDLPPKPKVQNGRSSPERRDISAASKSSMPRKRKLNILGSKSKRLKIESEDMIELK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0636 312 PANTHER SPLICEOSOME-ASSOCIATED PROTEIN CWC27 HOMOLOG 5 189 - -
Amo02g0636 312 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Amo02g0636 312 SUPERFAMILY Cyclophilin-like 14 171 IPR029000 -
Amo02g0636 312 MobiDBLite consensus disorder prediction 239 260 - -
Amo02g0636 312 MobiDBLite consensus disorder prediction 175 312 - -
Amo02g0636 312 MobiDBLite consensus disorder prediction 224 238 - -
Amo02g0636 312 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 5 189 IPR044666 -
Amo02g0636 312 MobiDBLite consensus disorder prediction 201 223 - -
Amo02g0636 312 MobiDBLite consensus disorder prediction 297 312 - -
Amo02g0636 312 Gene3D - 2 177 IPR029000 -
Amo02g0636 312 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 159 IPR002130 GO:0000413|GO:0003755
Amo02g0636 312 MobiDBLite consensus disorder prediction 175 192 - -
Amo02g0636 312 Coils Coil 301 312 - -
Amo02g0636 312 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Amo02g0636 312 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Amo02g0636 312 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Amo02g0636 312 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Amo02g0636 312 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Amo02g0636 312 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0636 Amo-Chr2 8374683 8381011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0636 9 158 U-box Gene Family AT5G67530 50.000 1.32e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0636 K12737 - mnt:21386554 381.333