Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0618 ATGGCACATCCTGCAGAAATTTCATCCCCTTCCTTCACCGGTGAATGGGAGTATGATGTTTTCCTCAGTTTTAGAGGGAAAGATACCCGCCACAATTTCACTGGTAATCTCTACCATTCTTTGGATCAAAAGGGAATACACACCTTCATCGATGATGAAGACCTTAGAAAGGGAGAAGAAATTAAGCCATCCCTTCTCAAAGCAATTCAAGAATCTAGGACCGCCATAGTTGTTTTCTCGGAAAACTATGCGTCCTCAACTTACTGTTTGGATGAACTTGTCGCAATTCTTGAGCATTTGAAAGCAGAAGGTCGACTTGTTTGGCCTATCTTTTATGATGTGGATCCATCCGTTGTTCGACATCAGAGGGGTAGTTATGCAGAGGCTTTAGCAAAACATGAAGAAAGGTACCAAGATGACAAGGGCAAAGTGAAAAAATGGAGGAATGCTTTGCTTGAAGCAGCTAATTTGTCTGGTTGGCATTTCATACAGGGGTCTCAAACAGAATATAAGTTTATTACAAATATCATTAGCACTGTCTCCAAAAAGCTCAATCACACTCCTTTACATGTTGCTGACAACCCAGTTGGGCTGGGATCACCGGTGCTTCAAGTGAAATCTATTATGGAAATTGGCTCTAATGAGAGAGTTAAGATGATCGGAATTTGTGGGACTGGTGGAATAGGTAAAACAACAATTGCACGAGCTGTGTATAACCTGCTCGCTGACCAATTTGATGGTTTGTGTTTTCTTGCGGACATAAGAGAAATGACGATTGATAAGCATGGCCTTGTACAACTGCAGGAAACACTACTTTCTGAAATACTTGGAGAGAAAGATATTAAGATTGGATGTGTCAATAAAGGGATTCCACTAATAAAAAGGAGGCTCCAAAGAAAGAAGGTCCTATTGGTACTTGATGATGTGGACAATCTTAAACAGTTAAAGGCAATTGCTGGAGGAAATGATTGGTTTGGCTTTGGTAGTCGAATCATTATCACATCTAGAGACAAGCATCTGTTAAGTGCTCATGGGGTGAGTGAGTTTTATGAGGTTAAAGAGTTAAGTAAAAGAGATGCACTTGAATTGTTCAGTTGGAATGCCTTCAAAAGCAACAAAGTTGATCCAGGTTATGCAAATATTTCAAGCCGTGTCCTGTTGTATGCCGGTGGTCTTCCTTTAGCTCTGCAAGTAATTGGTTCCAACTTGTATAATAGAGGCATTGATGAATGGAAGTCTGCGTTAGATAAATATGAAAGAATTCCTAATAAAGAGGTTAATGAAATACTTAAGGTAAGTTATGATGGTTTGGAGGAAGATGAGAAGAATATTTTCCTTGACATTGCTTGTTTCTTCAACAAATACAAAATGTCCTATGTCAGAGGAATGCTACATGCACATGGTTTCCACCCAGAACATGGCATCCGAGTTTTGGTTGACAAATCTCTTGTGAGTATTGATGTAAATGATTGTCTGAGAATGCATGACTTGATTCAGGACATGGGTAGAGAAATTGTTAGACAGGAATCTACTTCTGAGCCTGGCAAACGTAGTAGATTGTGGTTTGATGAGGATATTTTTCATGTTTTGCAAAATGAGACGGTATGTTGGATTCTTCTTGATTTTGTTTTCCTTTTCTTTTCTGACAATGTTCTGATTTGGTTATGTTTGGTGCTTGAGAAGGGAACCGATAAAGTCGAAGTCATAATTTTGAACTCAAGCAGACAAAAAGAAGTGTGTTGGAATGGGAATGCATTCCAGAAGATGAGGAATCTTAGAGTTCTTATTGTTGGGGATGCATACTTTTCTACAGGTCCCAAACATCTCCCAAATAGTTTGCGGGTTTTGGATTGGGTTGGATATCCATCAACATATTTACCATCTGGTTTTAATCCTACTGAGCTCTCCATACTCAGCATGATTAGTAGCTGCCTTAAATTCGACAAACCACTCAAGGTGTTTTGTTCTTTGAGTTTTATGAATTTTGAAGATTGTAAATTGTTAAGACAAGTACCCGTCCTTTTTGGACTCCCAAACTTAAGGGCATTGTGTCTTGATAATTGCACCAACTTAGTTAAAGTTCATGATTCTGTTGGATTTCTTAAGAAACTAATTTTGTTGAGTGCTCAAGGATGCTCCAAGCTCCGAAGTTTTGTAAGTGCCATTAATTTGCCATCTCTTGAGACTCTAGACCTAAGGTGGTGCACAAGTCTTGAGAATTTTCCAGAAGTACTAGGACAAATGGAAAACCTCAAAGAGGTTTATTTGGATCACACTGCCATAAAAGAATTGCCATTTTCAATCCACCGTCTGATTGGGCTTGAACGGTTGTTCCTGAGGAGATGCAAAAATATCAACCTACTTCCAGTCAGCATTAGTTTATTACCCAAACTTGAGGTGTTGATTGATTACAAGGGCAGAGGATATCGATTGTATGAACCACACAAAGCTGAAGAAGCCCTGATGTCAAAAGTGTTCGTATCTCCCTCTTTAGAAGTGGACAAGGGATATTTGCTTCCCTTTGACAAAGCATATTGTATAACGATGATTGACTACAATGTCATCCAAGAATATCCACTAACCGGCATTGTTTTGCCTGAAAAACACGTCCATTTTGGGAGTGGATCATCTGTTTCGTTTTGGTTTCGTGAAAGATTTCCAGAGGTCACAGTCTTGCTTATTGCAGAACCTTCTTTATACATTGACATCATGCATAGTTCAGTGTGTGAGTTCAGATATTCAGTGGTCATCAATGGAATGAACCAATTCAGTTCTTCATGTGACTACATCATTTCTGAGAGGCGGAAATTGTGTCTGACTATCTTTCTGGGTGACCTTCAACGCCTGATTGAGGAGGGTGCTGTCAAAAGAGTGTTTTCCGATTCCAAGGATGAACGGAATCACGTTGAGGTTTCATGCGAACTAAAATATCACATGCCATATGATCCTAAGCATGTAAGTGAAGGCCAAAACAGAAGCATAGAAGGAACAATAAAGCAAAGCACCGTTCATGGGGACGTGTATCATACCCTATTAACATATCCATCTCCCTACTGCAAGAATAATTTCCTCTGCTACTACCAAAGCAAAGCACTTCAAAAACACATAAGAGAACAAAAGCTGGCACAACATGTGAAGCCAATCAAGTCTTACAGAATCGTTCATGGCATGCTGAGCTGGACTGACGATGGCTACACGCTTCAAGTACAAAGAATGCATTCTCCCGGACATTGGCAATCCATAATCACCAGTGTCCTCCATTACAAATCGACACAAATAGCTGAAGTTTGGGAAAATAGTTCGATTACTCGAGTTGACTTCCTCAAATTTCAACTATCTGAGTTCTGGATGGGCATGGAAGCTTTCTACAAAACATGA 3378 0.3967 MAHPAEISSPSFTGEWEYDVFLSFRGKDTRHNFTGNLYHSLDQKGIHTFIDDEDLRKGEEIKPSLLKAIQESRTAIVVFSENYASSTYCLDELVAILEHLKAEGRLVWPIFYDVDPSVVRHQRGSYAEALAKHEERYQDDKGKVKKWRNALLEAANLSGWHFIQGSQTEYKFITNIISTVSKKLNHTPLHVADNPVGLGSPVLQVKSIMEIGSNERVKMIGICGTGGIGKTTIARAVYNLLADQFDGLCFLADIREMTIDKHGLVQLQETLLSEILGEKDIKIGCVNKGIPLIKRRLQRKKVLLVLDDVDNLKQLKAIAGGNDWFGFGSRIIITSRDKHLLSAHGVSEFYEVKELSKRDALELFSWNAFKSNKVDPGYANISSRVLLYAGGLPLALQVIGSNLYNRGIDEWKSALDKYERIPNKEVNEILKVSYDGLEEDEKNIFLDIACFFNKYKMSYVRGMLHAHGFHPEHGIRVLVDKSLVSIDVNDCLRMHDLIQDMGREIVRQESTSEPGKRSRLWFDEDIFHVLQNETVCWILLDFVFLFFSDNVLIWLCLVLEKGTDKVEVIILNSSRQKEVCWNGNAFQKMRNLRVLIVGDAYFSTGPKHLPNSLRVLDWVGYPSTYLPSGFNPTELSILSMISSCLKFDKPLKVFCSLSFMNFEDCKLLRQVPVLFGLPNLRALCLDNCTNLVKVHDSVGFLKKLILLSAQGCSKLRSFVSAINLPSLETLDLRWCTSLENFPEVLGQMENLKEVYLDHTAIKELPFSIHRLIGLERLFLRRCKNINLLPVSISLLPKLEVLIDYKGRGYRLYEPHKAEEALMSKVFVSPSLEVDKGYLLPFDKAYCITMIDYNVIQEYPLTGIVLPEKHVHFGSGSSVSFWFRERFPEVTVLLIAEPSLYIDIMHSSVCEFRYSVVINGMNQFSSSCDYIISERRKLCLTIFLGDLQRLIEEGAVKRVFSDSKDERNHVEVSCELKYHMPYDPKHVSEGQNRSIEGTIKQSTVHGDVYHTLLTYPSPYCKNNFLCYYQSKALQKHIREQKLAQHVKPIKSYRIVHGMLSWTDDGYTLQVQRMHSPGHWQSIITSVLHYKSTQIAEVWENSSITRVDFLKFQLSEFWMGMEAFYKT* 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0618 1125 SUPERFAMILY "Winged helix" DNA-binding domain 425 531 IPR036390 -
Amo02g0618 1125 Coils Coil 130 150 - -
Amo02g0618 1125 Gene3D - 14 182 IPR035897 -
Amo02g0618 1125 Pfam NB-ARC domain 215 434 IPR002182 GO:0043531
Amo02g0618 1125 Pfam TIR domain 18 189 IPR000157 GO:0007165
Amo02g0618 1125 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Amo02g0618 1125 Gene3D - 354 438 IPR042197 -
Amo02g0618 1125 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Amo02g0618 1125 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 748 - -
Amo02g0618 1125 Gene3D - 183 347 IPR027417 -
Amo02g0618 1125 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 748 IPR044974 GO:0006952
Amo02g0618 1125 SUPERFAMILY L domain-like 569 802 - -
Amo02g0618 1125 PRINTS Disease resistance protein signature 296 310 - -
Amo02g0618 1125 PRINTS Disease resistance protein signature 389 403 - -
Amo02g0618 1125 PRINTS Disease resistance protein signature 219 234 - -
Amo02g0618 1125 PRINTS Disease resistance protein signature 722 738 - -
Amo02g0618 1125 SMART AAA_5 216 355 IPR003593 -
Amo02g0618 1125 SMART till_3 17 157 IPR000157 GO:0007165
Amo02g0618 1125 Gene3D Ribonuclease Inhibitor 565 721 IPR032675 -
Amo02g0618 1125 Gene3D Ribonuclease Inhibitor 722 803 IPR032675 -
Amo02g0618 1125 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 448 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0618 Amo-Chr2 7988460 8015971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0618 10 801 WRKY Transcription Factor Family AT4G12020 33.333 2.33e-96 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0618 - - ahf:112802989 1083.55