Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0588 ATGATACGGATGTTAGCATATGGCGTAGGAGCTGATGATGTTGATGATTATGTGCGCATAGGCGAGAGCACTACAATTGAATGCTTGGAAAAATTTGTTGAAGGTGTCATTTCGGTGTTCGAGGATGAATACTTGCGAAAAACCAAACCAAATGACGTACAACGCCTGCTACAAATGGCGGAGGGTCATGGCTTCCTTGGCATGTTGGGTAGCATTGACTGCATGCATTGGCAATGGAAAAATTGTCCAAAGGCGTGGAAAGGTATGTACATGAGTGGTTATCGTGGGGTTGCAACCATAGTACTTGAGGTTGTAGCATCTTCAGATCTTTGGATATGGCATGCGTTCTTTGGAGTTTCTGGTTCAAATAACGATATCAACGTGTTAGATTGTTCTCTAGTATTCGATGATATTCTAAATGATTGTACTCCGGAGGTAAATTATACTATGAATGGTAATAATTATACTATGGGATACTATTTAGCAGATGGTATTTATCCTGAATGGGTCACATTTGTCAAATCAATCTCAAAGCCACAAGGGGAGAAACGCAAGTTATTTGCACAATACCAAGGGCAAAGAAAAGATGTGGAGCGAGCATTCAGAGTGTTGCAAGCACGCTTTGCAATTATACGTGGTCCAGCTCGTTTTTTGGGAAAAGAAGAAGCTTGCCAACATAATGAGAGCTTGGTCAAACTAGAAATGGGACAAAAGAACAAGGGGGGATGTCAACAGCAAAATTTACTTCCCAAGGTTCTCATCGGTGCAAGTGGAGGAACCATTGCTGTTGTTGTGGCAACTTCATTGTTTATTTTGACACATCAAAAAAGAAAGCACGTCAAACTCAAACAACAATACTTTAAGCAAAATGGAGAAGAATCCTCACAGATTACTCAGATTTTCACATTAGAGGAACTAAAGAAGGCTACCAGCAATTATGATGAGAACTTAATACTTGGAAGAGGAGGTTACGGTACAGTTTTCAAAGGTTTTCTTGACGATAATAGAATTGTGGCAATCAAGAAGTCTAAAATAGTTGATCAGAGCCAAACAGAGCAGTTCATCAATGAGGTGATTGTTCTATCTCAAATCAATCATAGAAACATAGTGAAACTCTTAGGTTGCTGCTTAGAAGAAGAGGTTCCTTTACTAGTTTATGAGTTTGTTAACAATGGTACCCTCTTTGATTTTATCCACAATCAAATTCAAAACAATGTGAATAATTTGTTAACTTGGAACACACGTCTAAGGATAGCAGCAGAGGCAGCTAGTGCTCTATCTTATCTACACTCAGCAGCATCTATACCTATTATCCATAGAGATGTCAAGAGTGCAAATATTCTCTTAGATGACAATTACACTGCAAAAGTTTCCGATTTCGGAGCTTCAATATTGGTTCCACTAGATCAAGAAGCGTTGGCCACCATGGTGCAAGGAACTATTGGATACTTGGATCCAGAATACATGCAAACGAGTCAACTAACTGAAAAAAGTGATGTGTATAGTTTTGGAGTCGTACTTGTAGAACTTCTAACAAGCGAAAAACCTCTTTCTTTTGATAGGACGGAAGAAAAGAGAAGTCTTGCTCTTTACTTTCTGTCTTATCTAAAAGAGGATCGCTTGTTTGAAGTCCAAGAGATTGAAGAGGTTGCTTTTCTTGCAGCAAAATGTTTGAGACTTAATGGGGATGAGAGACCAAGTATGAAGGAAGTGGCAATGGAATTGGAGGGATTACAGTTAATGCAAAAACACCCTTGGATCAATGGGAACAAAAATTTGGAAGAGACTTGTTACTTGCTTCCCAGTTCATCATCCAAAACATGTGAATATGGTGATAGAAGTTGCCATAAAAATGCTGGGTATGATAGCATCAGAGATCAAGTACTAATTTCTTTTGATGATGGAAGATGA 1911 0.3883 MIRMLAYGVGADDVDDYVRIGESTTIECLEKFVEGVISVFEDEYLRKTKPNDVQRLLQMAEGHGFLGMLGSIDCMHWQWKNCPKAWKGMYMSGYRGVATIVLEVVASSDLWIWHAFFGVSGSNNDINVLDCSLVFDDILNDCTPEVNYTMNGNNYTMGYYLADGIYPEWVTFVKSISKPQGEKRKLFAQYQGQRKDVERAFRVLQARFAIIRGPARFLGKEEACQHNESLVKLEMGQKNKGGCQQQNLLPKVLIGASGGTIAVVVATSLFILTHQKRKHVKLKQQYFKQNGEESSQITQIFTLEELKKATSNYDENLILGRGGYGTVFKGFLDDNRIVAIKKSKIVDQSQTEQFINEVIVLSQINHRNIVKLLGCCLEEEVPLLVYEFVNNGTLFDFIHNQIQNNVNNLLTWNTRLRIAAEAASALSYLHSAASIPIIHRDVKSANILLDDNYTAKVSDFGASILVPLDQEALATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTSEKPLSFDRTEEKRSLALYFLSYLKEDRLFEVQEIEEVAFLAAKCLRLNGDERPSMKEVAMELEGLQLMQKHPWINGNKNLEETCYLLPSSSSKTCEYGDRSCHKNAGYDSIRDQVLISFDDGR* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0588 636 Pfam Protein kinase domain 315 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0588 636 Gene3D Phosphorylase Kinase; domain 1 272 388 - -
Amo02g0588 636 Pfam Plant transposon protein 43 222 IPR006912 -
Amo02g0588 636 CDD STKc_IRAK 319 578 - -
Amo02g0588 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Amo02g0588 636 ProSiteProfiles Protein kinase domain profile. 313 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0588 636 Gene3D Transferase(Phosphotransferase) domain 1 389 595 - -
Amo02g0588 636 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 9 203 600 - -
Amo02g0588 636 SMART serkin_6 313 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0588 636 SUPERFAMILY Protein kinase-like (PK-like) 299 586 IPR011009 -
Amo02g0588 636 ProSitePatterns Protein kinases ATP-binding region signature. 319 342 IPR017441 GO:0005524
Amo02g0588 636 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 203 600 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0588 Amo-Chr2 7594751 7598059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0588 252 636 Receptor kinase-like Gene Family AT1G21230 52.941 6.86e-129 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo02g0588 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0588 - - ahf:112805957 729.169