Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0572 TTGGATTTTTTGGATTATAAGATATCTTATGAGACAATCAAAAAAAGACATTACTACAAATTTTGTACCATTCAATGTGCTATTGATTTTATTTTTGGTACTAGCCAATCATTGTTTAAAAGGTGTAGCATAAATGTGATTGGATGGGCATTAGAAAAAGGGTTTGTAGGATATATAACAGCACAAAGGAGAACCAATTCAAATGGGTTTGTGTTCAAGAATTGCAATATCTTTAAAAATGGTTCTACTTTTTTAGGAAGGTCTTGGAGACCTTATGCTAGACCAACATTATTCAACCCTTTGATTGGGATCAATGGGATTACTCTCAACATGAGTAAGACTCTGAATAACATTATGTTTGCAGAGTATGACAATTTTGGACCAAGTTCTGATACCTCTAAACGAGTAAATTGGATTACAAAATTGGATTTAAAGACGGTTAATATGATAAAAATTATGAATTTCATAGACTCTGAAGGATGGCTTCGTCACAACCAACGGTTT 504 0.3234 LDFLDYKISYETIKKRHYYKFCTIQCAIDFIFGTSQSLFKRCSINVIGWALEKGFVGYITAQRRTNSNGFVFKNCNIFKNGSTFLGRSWRPYARPTLFNPLIGINGITLNMSKTLNNIMFAEYDNFGPSSDTSKRVNWITKLDLKTVNMIKIMNFIDSEGWLRHNQRF 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0572 168 Pfam Pectinesterase 12 156 IPR000070 GO:0030599|GO:0042545
Amo02g0572 168 Gene3D - 2 167 IPR012334 -
Amo02g0572 168 SUPERFAMILY Pectin lyase-like 15 163 IPR011050 -
Amo02g0572 168 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 165 - -
Amo02g0572 168 PANTHER PECTINESTERASE 10-RELATED 14 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0572 Amo-Chr2 7338600 7339678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0572 14 163 Carbohydrate Esterase AT1G05310 36.646 1.12e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0572 - - adu:107471663 207.223