Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0565 ATGGCAGAAACTAGAGTTCTACCTGTTGGATATAGGTTTCGTCCAACAGAAGAGGAACTTTTAATTCACTATCTCAATAACAAGCATTTGAAAAATGATGCAGAGATTAAGAACACTATTTCCCAAGTTGATCTTTGTAACTTTGATCCTTGGGATTTACCAGAACAATCGAAGGTGAAATCGGATGATCAAGAATGGTTTTTCTTCAATGAATTGAAATACATGAAAAACAAGCGGTGTAACAGAAAAACCAACATGGGATATTGGAAGATCACAGGAAAAGAGAGAATCATCAAAAGAAGAGGGACAGACAGTGTCATAGGTACAAAAAGAACACTAGTTTTCTACGAGCCTCCACATAATGTCAAAACCAATTGGGTTCTTCATGAATATCATGCATTTGATCAAAAGGTAGGTTCTTGCCAGAGCAACATCGTATTGAGCCGTGTAATAATGAATGCTGAGAAAAGGGAACAGAAGCTAAAGACAAAAGCAAGCAACATAGTCGAAGAGGAGGAAGCATGTGTTTCATCCGAGCGGCAACAACCTCAAGTTATAGATTATGAAATTCTCTCATCGGGAGAACAATCTTCAGTAGCCCATTCCGATAATGAAAACAATAATGCCGCGGAAGCAACATGGAGGCAAGATGCCGATATGAATATCGAGTATTTTTGGAATTTGCTGTTTTCTAGCATCGATGCTGACCCTCATGCTGAGTTCTTAAATTCGGTGTTGGCAGGGGATGATCAACTCTATGTTGATTCCGGCCACCATTGA 780 0.3923 MAETRVLPVGYRFRPTEEELLIHYLNNKHLKNDAEIKNTISQVDLCNFDPWDLPEQSKVKSDDQEWFFFNELKYMKNKRCNRKTNMGYWKITGKERIIKRRGTDSVIGTKRTLVFYEPPHNVKTNWVLHEYHAFDQKVGSCQSNIVLSRVIMNAEKREQKLKTKASNIVEEEEACVSSERQQPQVIDYEILSSGEQSSVAHSDNENNNAAEATWRQDADMNIEYFWNLLFSSIDADPHAEFLNSVLAGDDQLYVDSGHH* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0565 259 PANTHER FACTOR, PUTATIVE-RELATED 8 208 - -
Amo02g0565 259 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 208 - -
Amo02g0565 259 ProSiteProfiles NAC domain profile. 7 153 IPR003441 GO:0003677|GO:0006355
Amo02g0565 259 Pfam No apical meristem (NAM) protein 8 132 IPR003441 GO:0003677|GO:0006355
Amo02g0565 259 Coils Coil 151 171 - -
Amo02g0565 259 Gene3D NAC domain 16 158 IPR036093 GO:0003677|GO:0006355
Amo02g0565 259 SUPERFAMILY NAC domain 4 151 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0565 Amo-Chr2 7127716 7132393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0565 6 151 NAC Transcription Factor Family AT1G33060 47.712 4.09e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo02g0565 NAM 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0565 - - aip:107626709 467.618