Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0557 ATGATCCCAATATTAGAATTCACTAAATTGAGTAAATTTAATGTTAATAGGAATATTGTATACTATTATCAAGAATTACAGGGTAGTTGCATATCTGAGAAAATAACATTAAGGAGGACACTTGTTCTTTCTGCTTTTGTATCAACTTGTGTTTTTCCAACCTTATCTTCTTATGCCAAGACTAAAACTAAGAATCCATATGATGAAAAACGCCTCCTACAACAAAATAAACGGATACAGCAAGAAAACAATGCACCTGAGGATTTCCCAAATTTCATAAGAGAAGGTTTTGAAGTTAAAGTAGTAGCACCGGATAACTATACCAAGAGTGATTCGGGGCTCATATACCGGGATTTCGAAGTTGGTAAAGGTGATTGCCCAAAGGATGGTCAGCAGGTAACGTTTCACTATGTCGGCTATAACGAATCTGGCCGTCGTATAGACAGCACTTACTTACAGGGTTCTCCTGCCAGAATCCGTATGGGAACTAAAGCATTGGTTCCTGGATTTGAGGAAGGAATTAGAGACATGAGACCAGGTGGAAAGAGAAGAATCATTATTCCCCCTGAACTTGGGCCACCAGTTGGACCTTCAACCTTTTTCAGCTCAAAACAATTTGAAGTTTTTGATGTTGAATTATTAAGCATACAGAACTGTGAAAGGAGGACCATAGCTTTCTACTCTGATGTTGTATGCAACTGA 702 0.3818 MIPILEFTKLSKFNVNRNIVYYYQELQGSCISEKITLRRTLVLSAFVSTCVFPTLSSYAKTKTKNPYDEKRLLQQNKRIQQENNAPEDFPNFIREGFEVKVVAPDNYTKSDSGLIYRDFEVGKGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGSPARIRMGTKALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIAFYSDVVCN* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0557 233 SUPERFAMILY FKBP-like 51 217 - -
Amo02g0557 233 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 127 213 IPR001179 GO:0003755
Amo02g0557 233 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 130 217 IPR001179 GO:0003755
Amo02g0557 233 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 31 233 IPR044239 -
Amo02g0557 233 Gene3D - 63 225 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0557 Amo-Chr2 6953113 6957579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0557 120 219 Calmodulin-binding Proteins AT5G48570 32.353 2.77e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0557 - - var:108347486 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2845 12 114694023 114699399 Amo02g0557 02 6953113 6957579 hybridization