Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0553 ATGAACCCAGGGGAGAAGGAGGAAGTCTGCTCTCGCACCGTCCTGCTCTGTCGTCGCGGTAGCCGTCGATTGGGGTCAAGGCCGTCGCCGTCGCACCCTGTTCCACGCCGCCGCTGGGAGGAGCCGAAAGGGGAGAGGAGGTTGCCGTCAAACACGCCGCCACCAGAGTATTATGGGAGTGGAGAGACAAAGAAAGTGTCATGGAGAGAATCACTACTCAAAGGGTTGCGTCGTTTCCTCATTGAAAAAGAAGAAGATATTTTGAAGGCCTTAATGCTCGACTTAGGAAAGCATCAAGTTGAAGCTTTTAGAGATGAGGCAAAAAGGTTTATCCTTGGAGCCACTAATAGGAGCAGTAGCAGCTGGAAACACAGTGGTCTTAAAGCCTTCAGAGTTGTCACCAGCATGTTCTTCCATACTTGCCCTTGGACTTCCCAATTTCTTGGACTTCCCAATCATAAGGAAGCAATCTTCAGAGTTATAGCTGCTATTCTTCATCTTGGAAACATTAACTTTGCAAAATCAGAGGAAGAAACTGATTCATCAGTTCTAGAAAATGAAGAGTCCAAGTTGCATCTCCAAATAACCGCAGAACTTCTCATGGGCGATCCTAGTGCTTTGGAAGATGCACTTTGTAAGCGTGTGATGATTACCCCAAAGGAAGTTATTAAAAGAAGTCTTGATCCTCTTGGTGCAACGGTTAGCAGGGATGGTTTAGCCAAAACACTATATTCTTGTTTATTTGACTGGTTAGTCCAAAAAATCAATGTCTCAATTGGGCAAGACCCAGAGTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTAAGAATAACAGTTCTGAGCAATTTTGTATTAATTTCACAAATGAAAAGCTGCAGCAACATTTCAACCAGCATGTGTTTAAGATGGAACAAGAGAGATATACAAAAGAAGGGATTGACTGGAGCTACTTAGAATTTGTGGATAATCAAGATGTATTTGATCTAATTAAAAAGGTGGACCAATATGCTGTTACAAATGCAAATAGAGTACATAATTAA 1056 0.4252 MNPGEKEEVCSRTVLLCRRGSRRLGSRPSPSHPVPRRRWEEPKGERRLPSNTPPPEYYGSGETKKVSWRESLLKGLRRFLIEKEEDILKALMLDLGKHQVEAFRDEAKRFILGATNRSSSSWKHSGLKAFRVVTSMFFHTCPWTSQFLGLPNHKEAIFRVIAAILHLGNINFAKSEEETDSSVLENEESKLHLQITAELLMGDPSALEDALCKRVMITPKEVIKRSLDPLGATVSRDGLAKTLYSCLFDWLVQKINVSIGQDPESKCLIGVLDIYGFESFKNNSSEQFCINFTNEKLQQHFNQHVFKMEQERYTKEGIDWSYLEFVDNQDVFDLIKKVDQYAVTNANRVHN* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0553 351 PANTHER MYOSIN 153 337 - -
Amo02g0553 351 MobiDBLite consensus disorder prediction 33 47 - -
Amo02g0553 351 Gene3D Myosin VI head, motor domain, U50 subdomain 151 282 - -
Amo02g0553 351 MobiDBLite consensus disorder prediction 21 62 - -
Amo02g0553 351 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 58 109 IPR016162 GO:0016491
Amo02g0553 351 PRINTS Myosin heavy chain signature 268 296 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo02g0553 351 PRINTS Myosin heavy chain signature 321 349 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo02g0553 351 ProSiteProfiles Myosin motor domain profile. 155 351 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo02g0553 351 PANTHER MYOSIN-16 153 337 - -
Amo02g0553 351 Pfam Myosin head (motor domain) 148 337 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo02g0553 351 SMART MYSc_2a 65 351 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo02g0553 351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 338 IPR027417 -
Amo02g0553 351 Gene3D - 283 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0553 Amo-Chr2 6895061 6898772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0553 154 337 Myosins gene family AT1G54560 77.717 6.92e-92 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0553 K10357 - ahf:112805813 374.4