Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0549 ATGGATGGAGTGAGGGCAACGCTAATTAATACAACTGTATCCCCACTACTGAAACTCCAACCATGGATTCCTTCAAAAAGTGTTACCTCCAATGTTGCAGCCTCTTTCATTGAGACACTTGAAGCCAATGAGCTTCTCAAGGACCAAAAAACTGCCATGGCCAAGGCTTCTAAGGCATGTGCCTTTCTCAGGAGATGTCCTTCACTAACACTGGGTTCCATGTTGGAGGAGATTGCTGCTATTCTTCCTGGCCATGAATTTGCTTCTATTTTGTTGTCAAACATGGCTTATGCAGATGACGACGAATCTCTTGTTGAAGCTGAGACTGGTAAAGAGTCAGATTTTGATTTTGTGCAGAATGTTATATCAAGAGCCAATATGGAGAAACGTTTGATGTTTGTTTGGGATGCTTGCAAGGATCTTACCTTGATTATTTTAATGGTAGCTGCTGCAGCTTCATTAGTACTGGGAATAAAATCTGAGGGTATTAAGGAAGGATGGTATGATGGTGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTGTTGTTACAGCTACAAGTGATTATAAGCAGTCTCTTCAGTTTCGGGACCTAAATGAGGAGAAGAGAAACATTCGTTTGGAGGTTGAAAAGAATTCTAAGAACCCTATTCTGATATCTGGTTGTAAAGTTGCAGATGGCAGTGGTGTTATGCTCGTAATGTTTTACTTTCTTTTGCCATGTGTGTTAATGGCTTTGGGATCCGATGATGCTCTTAAGAGTGTTGGTTTAGTCTTAGCAGGACTTACCAACTGA 795 0.4075 MDGVRATLINTTVSPLLKLQPWIPSKSVTSNVAASFIETLEANELLKDQKTAMAKASKACAFLRRCPSLTLGSMLEEIAAILPGHEFASILLSNMAYADDDESLVEAETGKESDFDFVQNVISRANMEKRLMFVWDACKDLTLIILMVAAAASLVLGIKSEGIKEGWYDGGSIAFAVILVIVVTATSDYKQSLQFRDLNEEKRNIRLEVEKNSKNPILISGCKVADGSGVMLVMFYFLLPCVLMALGSDDALKSVGLVLAGLTN* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0549 264 PANTHER CALCIUM-TRANSPORTING ATPASE 9, PLASMA MEMBRANE-TYPE 125 212 - -
Amo02g0549 264 PANTHER CALCIUM-TRANSPORTING ATPASE 9, PLASMA MEMBRANE-TYPE 209 234 - -
Amo02g0549 264 SUPERFAMILY Calcium ATPase, transmembrane domain M 119 211 IPR023298 -
Amo02g0549 264 Coils Coil 195 215 - -
Amo02g0549 264 PANTHER CATION TRANSPORTING ATPASE 125 212 - -
Amo02g0549 264 PANTHER CATION TRANSPORTING ATPASE 209 234 - -
Amo02g0549 264 Gene3D - 133 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0549 Amo-Chr2 6832688 6836499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0549 87 214 Primary Pumps ATPases AT5G57110 59.231 2.18e-40 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0549 K01537 - aip:107633681 241.121